| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is engA
Identifier: 159900085
GI number: 159900085
Start: 4485763
End: 4487130
Strand: Reverse
Name: engA
Synonym: Haur_3568
Alternate gene names: 159900085
Gene position: 4487130-4485763 (Counterclockwise)
Preceding gene: 159900086
Following gene: 159900079
Centisome position: 70.7
GC content: 50.29
Gene sequence:
>1368_bases ATGGAAAAACCAATTGTGGCGATTGTTGGCCGACCTAACGTTGGCAAATCGACCTTGTTTAATAAGCTGATTGGCGAGCG CCGCGCGATTATTGCCGATGAAGCTGGTACAACCCGCGACCGCCAATATGGCGAAACCATCTGGAATGGCCGCGTATTTA CGATTGTGGATACAGCTGGGTTGTTGGTTGGCGATGATGACCCGAACTTGCCTTTGGCTGAAATTGTGCGCCGTACTCAC CAACAAGCTCAATTGGCGATCGATGAAGCCGATGTGATTGTGTTTATGGTCGATGTGCGTGAAGGACTGATTGCTGCTGA TGAAGAGGTTGCCGCCTTGTTACGTCGCAGCAGCAAGCCCGTGGTCTTGGGTGTAAACAAAGCCGATACCGAAGATCGCC GCCAGAATGCGGTCGAATTCTATAACCTTGGCTTGGGCGACCCAATTGCCTTGAGCGCTTACCATGGCACTGGCTCGGGC GATTTGCTCGATGAAATTGTACGCCACTTGCCAGCAGGCCAAGAAGAAGAGGAAGACGACAATTCGCTGAAAATTGCGAT TGTCGGGCGACCAAACGTTGGTAAATCGAGCTTGCTGAATAAATTGGTCGGCGAAGAGCGGGTGGTTGTCAGCAATATTC CTGGCACAACTCGCGATTCAATCGACACCAAATTGACCTATAAAGGCATTCCAATCACCTTGATCGACACCGCTGGGATT CGGCGGCGTGGCTCGATTGAGCAAGGGATTGAACGCTACAGCGTGTTACGCACGATGAAAGCGATCGAGCGTTGCCATAT TGCCTTGATTTTGGTCGATGCCCAAGAAGGCCCAACCGCTCAAGATACCCACGTCGCAGGTATGGTTTTGGAAGCTAACA AAGGCTTGGCGATTATCGTCAACAAATGGGATTTGATCGATAAAGCCAAATTCAGCTACGAAGATGCCAAAACTACGATG TCGCAGGTGTTTCACTTTGCGCCGTATGCGCCGATTGAATTTATTTCGGCAAAAACTGGCCAACGGGCTACTAAAGTGCT CGATATTGCCCAAACAATCCAGAGCGAACGCAACAAACGCGTAAGCACCTCGGATATTAACAACTTGTTGCGGGCGGCGG TGCGCGAACATCCACCAACAGCGATGCATAAAGGCGCTCACTTGCGCTTATTCTATGCAACTCAAGCCCAAGTCGAGCCA CCAGTGTTCCTGTTCTTCTCGAATGCGCCAGAACAAGTGCACTTTGGCTACAAGCGCTACCTCGAAAATCGTATTCGCGA ACAATATGGTTTTATTGGCACACCAATTATTTTGGTGTTCAAAGGCCGCGAAGAAGAGCAAACCGTCTCGGTTTCCGGTA AGCGCTAA
Upstream 100 bases:
>100_bases CAATCGCTGTATTGGGTCAAACGGCCACGATTGTGCAACTTGAACGTCGTAGAATGTAGTGATGTTGGCTTTTGGGCCGC ATTGCGAAAGAGGTATAACC
Downstream 100 bases:
>100_bases ATATTCTAGCATTCAATTAAAAAGCACTTCAATCAATTACGATTGAGGTGCTTTTTACGATTAACTATTTAATGATTAAT TCCAGCGAATTAGGCTAATT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLLVGDDDPNLPLAEIVRRTH QQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKPVVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSG DLLDEIVRHLPAGQEEEEDDNSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGI RRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIVNKWDLIDKAKFSYEDAKTTM SQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKRVSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEP PVFLFFSNAPEQVHFGYKRYLENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR
Sequences:
>Translated_455_residues MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLLVGDDDPNLPLAEIVRRTH QQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKPVVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSG DLLDEIVRHLPAGQEEEEDDNSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGI RRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIVNKWDLIDKAKFSYEDAKTTM SQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKRVSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEP PVFLFFSNAPEQVHFGYKRYLENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR >Mature_455_residues MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLLVGDDDPNLPLAEIVRRTH QQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKPVVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSG DLLDEIVRHLPAGQEEEEDDNSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGI RRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIVNKWDLIDKAKFSYEDAKTTM SQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKRVSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEP PVFLFFSNAPEQVHFGYKRYLENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=468, Percent_Identity=39.5299145299145, Blast_Score=318, Evalue=5e-88, Organism=Escherichia coli, GI2367268, Length=92, Percent_Identity=42.3913043478261, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788919, Length=183, Percent_Identity=31.6939890710383, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507259, Length=115, Percent_Identity=39.1304347826087, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323665, Length=149, Percent_Identity=36.241610738255, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI45550813, Length=182, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_HERA2 (A9B567)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001546332.1 - ProteinModelPortal: A9B567 - SMR: A9B567 - GeneID: 5735427 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_3568 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - BioCyc: HAUR316274:HAUR_3568-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 50384; Mature: 50384
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAG CCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEEECCC LLVGDDDPNLPLAEIVRRTHQQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKP EEECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCC VVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSGDLLDEIVRHLPAGQEEEEDD EEEECCCCCCHHHHHCCHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC NSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGI CCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCC RRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIV CCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEE NKWDLIDKAKFSYEDAKTTMSQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKR ECCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC VSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEPPVFLFFSNAPEQVHFGYKRY CCHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHH LENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR HHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCC >Mature Secondary Structure MEKPIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAG CCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEEECCC LLVGDDDPNLPLAEIVRRTHQQAQLAIDEADVIVFMVDVREGLIAADEEVAALLRRSSKP EEECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCC VVLGVNKADTEDRRQNAVEFYNLGLGDPIALSAYHGTGSGDLLDEIVRHLPAGQEEEEDD EEEECCCCCCHHHHHCCHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC NSLKIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGI CCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCC RRRGSIEQGIERYSVLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANKGLAIIV CCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEE NKWDLIDKAKFSYEDAKTTMSQVFHFAPYAPIEFISAKTGQRATKVLDIAQTIQSERNKR ECCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC VSTSDINNLLRAAVREHPPTAMHKGAHLRLFYATQAQVEPPVFLFFSNAPEQVHFGYKRY CCHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHH LENRIREQYGFIGTPIILVFKGREEEQTVSVSGKR HHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA