| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900079
Identifier: 159900079
GI number: 159900079
Start: 4477451
End: 4477888
Strand: Reverse
Name: 159900079
Synonym: Haur_3562
Alternate gene names: NA
Gene position: 4477888-4477451 (Counterclockwise)
Preceding gene: 159900085
Following gene: 159900078
Centisome position: 70.56
GC content: 51.37
Gene sequence:
>438_bases ATGTCCTCACCAATTGTGCAGATCGACTATGCCGTTGTGGATACGATCATCCAACGTTTCCAAAAACTGTATGACCAGAG TCAAACCATTCAAGCCAGCCTCTGCCAAACCATGGCCTCGTTACAAGCCGGCCAATGGCAAGGCAGTGCCGCCAACGCCT GTTTTCAAGAATTTGACCATGTGGTTAAGCCAGCTTTTCAGCGCTTGTTGCATTCATTGCAAGGCAGTGTTGAAACCACC AAGGCCATTCGGAAAATCATGGCCGATGCTGAGGCTGAAGCCGCCGCACTGTTTCGCGGCGATGTTGGCGCGATGGCCGT AGGTGGTAATGGTGCGATGTTTGTCCAATTCGTTGATGGCGAGATACGATCGAAATCTACCCCAACCCCAACGCCACCGA GCGACAAACCGCTGCTGCCGCCATTTTTCAAAAATTAA
Upstream 100 bases:
>100_bases TGGCATTATACTCAAGCTGATTGAGTAGAACTGAGGGCGATCCTCTCCAATTTCCTGCATGCTTGCCAGAGTTCCCCCCC TCGTTGTGAGGTCTGACGCT
Downstream 100 bases:
>100_bases TTGATTTTATTCTCCAAGCGGTCGAAACATGGCAGAATGATCGTGCCGATGGTGTGCAAGTTAATCAAGATGGCTCGGTC AGTTATGCCGATGCCACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSSPIVQIDYAVVDTIIQRFQKLYDQSQTIQASLCQTMASLQAGQWQGSAANACFQEFDHVVKPAFQRLLHSLQGSVETT KAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMFVQFVDGEIRSKSTPTPTPPSDKPLLPPFFKN
Sequences:
>Translated_145_residues MSSPIVQIDYAVVDTIIQRFQKLYDQSQTIQASLCQTMASLQAGQWQGSAANACFQEFDHVVKPAFQRLLHSLQGSVETT KAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMFVQFVDGEIRSKSTPTPTPPSDKPLLPPFFKN >Mature_144_residues SSPIVQIDYAVVDTIIQRFQKLYDQSQTIQASLCQTMASLQAGQWQGSAANACFQEFDHVVKPAFQRLLHSLQGSVETTK AIRKIMADAEAEAAALFRGDVGAMAVGGNGAMFVQFVDGEIRSKSTPTPTPPSDKPLLPPFFKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15721; Mature: 15590
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPIVQIDYAVVDTIIQRFQKLYDQSQTIQASLCQTMASLQAGQWQGSAANACFQEFDH CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VVKPAFQRLLHSLQGSVETTKAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMFVQFVDG HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCEEEEEEECC EIRSKSTPTPTPPSDKPLLPPFFKN HHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSPIVQIDYAVVDTIIQRFQKLYDQSQTIQASLCQTMASLQAGQWQGSAANACFQEFDH CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VVKPAFQRLLHSLQGSVETTKAIRKIMADAEAEAAALFRGDVGAMAVGGNGAMFVQFVDG HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCEEEEEEECC EIRSKSTPTPTPPSDKPLLPPFFKN HHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA