The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900076

Identifier: 159900076

GI number: 159900076

Start: 4475672

End: 4476247

Strand: Reverse

Name: 159900076

Synonym: Haur_3559

Alternate gene names: NA

Gene position: 4476247-4475672 (Counterclockwise)

Preceding gene: 159900077

Following gene: 159900075

Centisome position: 70.53

GC content: 46.35

Gene sequence:

>576_bases
ATGGCATGGTTTCGCTATTGGTGGTTGCTCTTATTGCTGATTGGCTGCATCCAAACCGATCAACCTCTACCCACAGCCAA
TCAGTTTGCGATTTATATCTTCGATCAAGATGCCGTACCGGGACTTGGATCAAGCGCCGAAACTGCATGGCCGATTTTAC
AAGCTGTGCCTTTAGCACAAAGTGCGTTTACCGTAACCGAAGATCTATTGCTCAGTTATCATTGGCAAACCCAAACCATC
ACCTTTACTAATCCATGGGGGCAAACTGATCGTGATGCGCCAGGTTATATGTGGAATGGTGGAGGTTCATTTGTCGTAAT
CTATAACGGGCAACGCTTGTTTGGAGGCAAGGTCGTGGCCGCAATTAGCCCTCGGCGATTTGACTACCCAGCGATGGCCT
TATCAAATGACTATATTCTGATGGAGAATCCAGAATTACAAGGCAAGTTGGTCTATTCATTTCATCCAAAATCGGCAGTT
ATGTACCCGCCACAATCGCAATTTTTAGCAGCTGATCCGACTATCACCGAAGCCGTCAAGCAGCATTTGCGCGAAATTGG
AAAGTTGGTTGAGTAA

Upstream 100 bases:

>100_bases
TGCTCCCCATAGTTTTCCCAACCCCGATCCAACAATCGGCGAGGCAGTCAAAGAGCATTTGCGCCAGCTTGGCAAATTGG
TTGAGTAAGGGATTCTGACC

Downstream 100 bases:

>100_bases
GGGATTCTGACCATGCGCTATTGGTGGTTGCTCATAGTGCTGATTGGCTGCATCCAAACCGATCAAACTCCACCCGCAGC
CAATCAACTTACAAGCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTI
TFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAV
MYPPQSQFLAADPTITEAVKQHLREIGKLVE

Sequences:

>Translated_191_residues
MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTI
TFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAV
MYPPQSQFLAADPTITEAVKQHLREIGKLVE
>Mature_190_residues
AWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQSAFTVTEDLLLSYHWQTQTIT
FTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVAAISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVM
YPPQSQFLAADPTITEAVKQHLREIGKLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21492; Mature: 21361

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCH
SAFTVTEDLLLSYHWQTQTITFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVA
HHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCEEECCEEEE
AISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVMYPPQSQFLAADPTITEAVK
EECCCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCEEECCCCCCEEECCCHHHHHHH
QHLREIGKLVE
HHHHHHHHHCC
>Mature Secondary Structure 
AWFRYWWLLLLLIGCIQTDQPLPTANQFAIYIFDQDAVPGLGSSAETAWPILQAVPLAQ
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCH
SAFTVTEDLLLSYHWQTQTITFTNPWGQTDRDAPGYMWNGGGSFVVIYNGQRLFGGKVVA
HHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCEEECCEEEE
AISPRRFDYPAMALSNDYILMENPELQGKLVYSFHPKSAVMYPPQSQFLAADPTITEAVK
EECCCCCCCCCEEECCCEEEEECCCCCEEEEEEECCCCEEECCCCCCEEECCCHHHHHHH
QHLREIGKLVE
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA