| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900041
Identifier: 159900041
GI number: 159900041
Start: 4437249
End: 4437689
Strand: Reverse
Name: 159900041
Synonym: Haur_3524
Alternate gene names: NA
Gene position: 4437689-4437249 (Counterclockwise)
Preceding gene: 159900042
Following gene: 159900037
Centisome position: 69.92
GC content: 47.39
Gene sequence:
>441_bases ATGCAAAGCAAAGCTACGACTGTCGAGCAATATCTGGCAGAGTTGGCTCCTGAGCGCTACAGTGTGATCGAGCCAGTGCG CCAATTGATCTTGCAGCATTTGCCCGAGGGCTATGTTGAAACCTGCAATTGGGGTATGCTGAGCTATGAAATACCCTTGG AGCGCTTTCCCAATACCTACAATCGCCAACCGTTGAGCTATATCGCTTTGGCTGCCCAGAAAAATTATAATTCGTTATAT TTAATGCCTGTTGCTTACGATGAACCCTATGCGGCGTGGTTGCAGCAGCAATTTAGCCAAGCAGGCAAAAAATTCGATAT GGGCAAATCGTGTTTGCGCTTTCGTAAACTCGAAGATTTGCTGCCCGATGTGATCGCCCAAGTCATTCAGCGCTATTCGG TTGATGACTATATTGGCTATTATCGGGCGATGCGAGGGTAA
Upstream 100 bases:
>100_bases GTTGGTACAACGCCCGCCAGCTTGGTTGATTACGGCTCAAGCCAATTATCAACGCTATTTAAATTTAGCCCAACAGGCTA TCAATCAATGGAGGTGATCG
Downstream 100 bases:
>100_bases GTTGAGGGATTAGGGCGCAGAGAGTTGAGGCTAGGAAGTAGGGTCAGGGGCCAGAAAGAAATTATGAATTTAACGCAGAG GCGCAGAGCAACCATGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG
Sequences:
>Translated_146_residues MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG >Mature_146_residues MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17094; Mature: 17094
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTY CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHCCCCC NRQPLSYIALAAQKNYNSLYLMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDL CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LPDVIAQVIQRYSVDDYIGYYRAMRG HHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTY CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHCCCCC NRQPLSYIALAAQKNYNSLYLMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDL CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LPDVIAQVIQRYSVDDYIGYYRAMRG HHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA