Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900041

Identifier: 159900041

GI number: 159900041

Start: 4437249

End: 4437689

Strand: Reverse

Name: 159900041

Synonym: Haur_3524

Alternate gene names: NA

Gene position: 4437689-4437249 (Counterclockwise)

Preceding gene: 159900042

Following gene: 159900037

Centisome position: 69.92

GC content: 47.39

Gene sequence:

>441_bases
ATGCAAAGCAAAGCTACGACTGTCGAGCAATATCTGGCAGAGTTGGCTCCTGAGCGCTACAGTGTGATCGAGCCAGTGCG
CCAATTGATCTTGCAGCATTTGCCCGAGGGCTATGTTGAAACCTGCAATTGGGGTATGCTGAGCTATGAAATACCCTTGG
AGCGCTTTCCCAATACCTACAATCGCCAACCGTTGAGCTATATCGCTTTGGCTGCCCAGAAAAATTATAATTCGTTATAT
TTAATGCCTGTTGCTTACGATGAACCCTATGCGGCGTGGTTGCAGCAGCAATTTAGCCAAGCAGGCAAAAAATTCGATAT
GGGCAAATCGTGTTTGCGCTTTCGTAAACTCGAAGATTTGCTGCCCGATGTGATCGCCCAAGTCATTCAGCGCTATTCGG
TTGATGACTATATTGGCTATTATCGGGCGATGCGAGGGTAA

Upstream 100 bases:

>100_bases
GTTGGTACAACGCCCGCCAGCTTGGTTGATTACGGCTCAAGCCAATTATCAACGCTATTTAAATTTAGCCCAACAGGCTA
TCAATCAATGGAGGTGATCG

Downstream 100 bases:

>100_bases
GTTGAGGGATTAGGGCGCAGAGAGTTGAGGCTAGGAAGTAGGGTCAGGGGCCAGAAAGAAATTATGAATTTAACGCAGAG
GCGCAGAGCAACCATGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY
LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG

Sequences:

>Translated_146_residues
MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY
LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG
>Mature_146_residues
MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTYNRQPLSYIALAAQKNYNSLY
LMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDLLPDVIAQVIQRYSVDDYIGYYRAMRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17094; Mature: 17094

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHCCCCC
NRQPLSYIALAAQKNYNSLYLMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDL
CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LPDVIAQVIQRYSVDDYIGYYRAMRG
HHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQSKATTVEQYLAELAPERYSVIEPVRQLILQHLPEGYVETCNWGMLSYEIPLERFPNTY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHCCCCC
NRQPLSYIALAAQKNYNSLYLMPVAYDEPYAAWLQQQFSQAGKKFDMGKSCLRFRKLEDL
CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LPDVIAQVIQRYSVDDYIGYYRAMRG
HHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA