| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900042
Identifier: 159900042
GI number: 159900042
Start: 4437693
End: 4438667
Strand: Reverse
Name: 159900042
Synonym: Haur_3525
Alternate gene names: NA
Gene position: 4438667-4437693 (Counterclockwise)
Preceding gene: 159900043
Following gene: 159900041
Centisome position: 69.94
GC content: 49.95
Gene sequence:
>975_bases ATGGATCAACGCTTGCGCGAAGTGCTCGAATATTTGGCCAAGCAATCGTTGGTCGAGCCAACCCGTTGGCAGCATTGGCA GTTAACTCCAATTGCTGGTGGCGCGAACAATCGGGTCTATCGGGCGCAATCCACCAATGCCGATTATGCAATTAAGTGGA CGATTCGTGATGAGCGTCGCCGCGCATGGCGTGAATATCAATCACTCCAGATAGTAGCTGAGTTTAATCATTTGCTGGCT CCGCAGGCAGTTTGGCTTGATGAAGCCAATTTTGCCCAGCCAGTTGTCGTGCAAACATGGCTCGATTTTCCAGCGTTGAC GAGCATTCCCCAGGATTCGGCTCAATGGCAAGGCTTAATTGCTCACTACTGGGCGCTTCGCCAAATAACCCAAACGTCAG CCACATTTGAACTCCCCAAAGCAACCCTCAATATGACCAGTGTTGCTGATGGCAAGGCTTTGATCGAACAACATTGCGCC AAAATTCCGACTGATCAATTGCCGATTACGCTCGAAAATCTATTAATCTGGCTAGAAACTTGGGCTGTACCCGAGTTGCC TAGCCCGCCAATGAGTTTGTGTCGGGTTGATAGCAATTGGCGTAATTTTTTGGTAACACCCACAGGTTTTGTCTCAGTCG ATTGGGAAAATGCAGGCTGGGGCGATCCAAACTTTGATATTGTTGATCTGATGACCCATCCGGCCTATGCTGAGGTGCCG ACTGAGCATTGGTCGTGGTTTGTGCAGGCCTATTGTGGCTTTGGCGACGACCCACGGGCTGTCCAGCGAATTGAGATTTA TCGCACGTTGATGCTGATTTGGTGGGTTGTGCGTTGGCAGCGATACCTGTATGAAGTGCCACGTGGCTTGGATGAACGGT TGGTACAACGCCCGCCAGCTTGGTTGATTACGGCTCAAGCCAATTATCAACGCTATTTAAATTTAGCCCAACAGGCTATC AATCAATGGAGGTGA
Upstream 100 bases:
>100_bases TAATCAGTTTTGTGCGCGAAACCTATGGCGAATTGAACATTGTCAAGGTAGCCCAGGCATTGGCTGTGCCCCGTGTTACT GCTGCACAATCAGGTTAGTT
Downstream 100 bases:
>100_bases TCGATGCAAAGCAAAGCTACGACTGTCGAGCAATATCTGGCAGAGTTGGCTCCTGAGCGCTACAGTGTGATCGAGCCAGT GCGCCAATTGATCTTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MDQRLREVLEYLAKQSLVEPTRWQHWQLTPIAGGANNRVYRAQSTNADYAIKWTIRDERRRAWREYQSLQIVAEFNHLLA PQAVWLDEANFAQPVVVQTWLDFPALTSIPQDSAQWQGLIAHYWALRQITQTSATFELPKATLNMTSVADGKALIEQHCA KIPTDQLPITLENLLIWLETWAVPELPSPPMSLCRVDSNWRNFLVTPTGFVSVDWENAGWGDPNFDIVDLMTHPAYAEVP TEHWSWFVQAYCGFGDDPRAVQRIEIYRTLMLIWWVVRWQRYLYEVPRGLDERLVQRPPAWLITAQANYQRYLNLAQQAI NQWR
Sequences:
>Translated_324_residues MDQRLREVLEYLAKQSLVEPTRWQHWQLTPIAGGANNRVYRAQSTNADYAIKWTIRDERRRAWREYQSLQIVAEFNHLLA PQAVWLDEANFAQPVVVQTWLDFPALTSIPQDSAQWQGLIAHYWALRQITQTSATFELPKATLNMTSVADGKALIEQHCA KIPTDQLPITLENLLIWLETWAVPELPSPPMSLCRVDSNWRNFLVTPTGFVSVDWENAGWGDPNFDIVDLMTHPAYAEVP TEHWSWFVQAYCGFGDDPRAVQRIEIYRTLMLIWWVVRWQRYLYEVPRGLDERLVQRPPAWLITAQANYQRYLNLAQQAI NQWR >Mature_324_residues MDQRLREVLEYLAKQSLVEPTRWQHWQLTPIAGGANNRVYRAQSTNADYAIKWTIRDERRRAWREYQSLQIVAEFNHLLA PQAVWLDEANFAQPVVVQTWLDFPALTSIPQDSAQWQGLIAHYWALRQITQTSATFELPKATLNMTSVADGKALIEQHCA KIPTDQLPITLENLLIWLETWAVPELPSPPMSLCRVDSNWRNFLVTPTGFVSVDWENAGWGDPNFDIVDLMTHPAYAEVP TEHWSWFVQAYCGFGDDPRAVQRIEIYRTLMLIWWVVRWQRYLYEVPRGLDERLVQRPPAWLITAQANYQRYLNLAQQAI NQWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37931; Mature: 37931
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRLREVLEYLAKQSLVEPTRWQHWQLTPIAGGANNRVYRAQSTNADYAIKWTIRDERR CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECHHHH RAWREYQSLQIVAEFNHLLAPQAVWLDEANFAQPVVVQTWLDFPALTSIPQDSAQWQGLI HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHH AHYWALRQITQTSATFELPKATLNMTSVADGKALIEQHCAKIPTDQLPITLENLLIWLET HHHHHHHHHHHHCCCEECCHHHCCHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH WAVPELPSPPMSLCRVDSNWRNFLVTPTGFVSVDWENAGWGDPNFDIVDLMTHPAYAEVP CCCCCCCCCCHHHHEECCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCHHCCC TEHWSWFVQAYCGFGDDPRAVQRIEIYRTLMLIWWVVRWQRYLYEVPRGLDERLVQRPPA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC WLITAQANYQRYLNLAQQAINQWR EEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQRLREVLEYLAKQSLVEPTRWQHWQLTPIAGGANNRVYRAQSTNADYAIKWTIRDERR CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECHHHH RAWREYQSLQIVAEFNHLLAPQAVWLDEANFAQPVVVQTWLDFPALTSIPQDSAQWQGLI HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHH AHYWALRQITQTSATFELPKATLNMTSVADGKALIEQHCAKIPTDQLPITLENLLIWLET HHHHHHHHHHHHCCCEECCHHHCCHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH WAVPELPSPPMSLCRVDSNWRNFLVTPTGFVSVDWENAGWGDPNFDIVDLMTHPAYAEVP CCCCCCCCCCHHHHEECCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCHHCCC TEHWSWFVQAYCGFGDDPRAVQRIEIYRTLMLIWWVVRWQRYLYEVPRGLDERLVQRPPA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC WLITAQANYQRYLNLAQQAINQWR EEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA