| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900035
Identifier: 159900035
GI number: 159900035
Start: 4430418
End: 4430789
Strand: Reverse
Name: 159900035
Synonym: Haur_3518
Alternate gene names: NA
Gene position: 4430789-4430418 (Counterclockwise)
Preceding gene: 159900036
Following gene: 159900034
Centisome position: 69.81
GC content: 53.23
Gene sequence:
>372_bases ATGGCGGTTCAATCTCAATCAATAGGTGGCCTGAGTGCCATCCGTAATCGCAGCACCAGCCAATCAACCCGTCAACGTCG CGCTAGCGTGCTGATCGCCTTGGCGGTGGTGGTGGCCTTAATGTGTATGCTCTATTTGGCGCAAACTGGGCGAATTGCCG CGCTGGGTTTTCGGCTCGAACAACTCGAAGTGCAGCAGACGAAATTAGAGCGCGAGAATAACCAGTTGCTCTATGAGATT GAACAATCGCAATCGCTTGAGGTTGTGCGTCAGCGGGCAACTGCCTTGGGCTTCAAGCCAATTGACGCAAGCCAAGCCGA ATATCTGATTATCGAACTACCACACCATCGTTGGACGGCTCAGGCTCGTTAG
Upstream 100 bases:
>100_bases GCCAACCCGCGGGCGCGTTCAGCTAAATTGCGGGTTGCCGAACGACGATTAACCAAGACGCTTGCGTCTTAACCATAGCT CAACTGTCGGAGGATGCTTG
Downstream 100 bases:
>100_bases CGCCCGTTCCAGCCTTTGCTGCTTGGAGGAACTTGCATGGCCTCACGTACCGCTCCAACTCCTCAAAACCCACCATTGCT CTCACGCTGGCGGATCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAVQSQSIGGLSAIRNRSTSQSTRQRRASVLIALAVVVALMCMLYLAQTGRIAALGFRLEQLEVQQTKLERENNQLLYEI EQSQSLEVVRQRATALGFKPIDASQAEYLIIELPHHRWTAQAR
Sequences:
>Translated_123_residues MAVQSQSIGGLSAIRNRSTSQSTRQRRASVLIALAVVVALMCMLYLAQTGRIAALGFRLEQLEVQQTKLERENNQLLYEI EQSQSLEVVRQRATALGFKPIDASQAEYLIIELPHHRWTAQAR >Mature_122_residues AVQSQSIGGLSAIRNRSTSQSTRQRRASVLIALAVVVALMCMLYLAQTGRIAALGFRLEQLEVQQTKLERENNQLLYEIE QSQSLEVVRQRATALGFKPIDASQAEYLIIELPHHRWTAQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13835; Mature: 13704
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQSQSIGGLSAIRNRSTSQSTRQRRASVLIALAVVVALMCMLYLAQTGRIAALGFRLE CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH QLEVQQTKLERENNQLLYEIEQSQSLEVVRQRATALGFKPIDASQAEYLIIELPHHRWTA HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC QAR CCC >Mature Secondary Structure AVQSQSIGGLSAIRNRSTSQSTRQRRASVLIALAVVVALMCMLYLAQTGRIAALGFRLE CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH QLEVQQTKLERENNQLLYEIEQSQSLEVVRQRATALGFKPIDASQAEYLIIELPHHRWTA HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC QAR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA