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The map label for this gene is spoVD [H]

Identifier: 159900034

GI number: 159900034

Start: 4428555

End: 4430381

Strand: Reverse

Name: spoVD [H]

Synonym: Haur_3517

Alternate gene names: 159900034

Gene position: 4430381-4428555 (Counterclockwise)

Preceding gene: 159900035

Following gene: 159900033

Centisome position: 69.81

GC content: 50.79

Gene sequence:

>1827_bases
ATGGCCTCACGTACCGCTCCAACTCCTCAAAACCCACCATTGCTCTCACGCTGGCGGATCAACGCAATTTTGCTGATCTG
TGTGGTGTTTGCTTTAGCCAATGCCCATAAATTATTTGAAGTGCAAATTCAACGCCATGATCAGCTTTCGGGTTTGGCGC
AGAGTGAGTTTCGCCAAAATCGCACAATTCAGCCTGCCCGTGGCATCATTCGCGATAGCACTGGCAGTGTGTTGGCAATG
AATGTCGATCGCGATACGCTCGGCGTTGCTCCGCCTTATATCGATGATGACCCGACCGACCCGAATGAATCGGATCGTTT
GGCCTTGTTGCTTTCGCCGTTGATTGGCAAAGCCCCTAGCGAAATCAAGCAACTGCTGCTGACCAAAAATCGCGAATATG
TGGTCTTGGCGCGGCGCTTAACCCCTGAGGTCAGCGAGCAAATTCGGGCGCTCAAAAATACCGCGCTAACGCTTAATCCA
GAGCCAGTGCGGGTGTACCCTAAAGGCACATTTGCGGCGAATGTGGTTGGGGTTGCCAATTACGAAAATGTTGGGATTAG
CGGGGTTGAGGGCTATAACAATTCGTTGTTAGCTGGGGTCGCTGGCTCTTTAGAAGCCGAAATCGATTCGGCCTCGAACT
CGATTTGGATCGAGCCGCCAACCGTGCAAGAGCCACGCGATGGCGCTGACATCACTTTGACGATTGATCCAACTGCCCAA
CATATTGCCGAAGAAGAATTGCAAAATGCCTTAGTCAACCATGGCGCAAGTGGCGGCTCAATCACCGTGATGGATTCCAA
AACTGGCGCGATTTTGGCCATGGCAACTTCCACCAAGTTTGATCCCAATCGTTATACCGAATATCAACCAGAAATTTACA
ACAAAAACTCGGTGATTACCGATCAATACGAACCTGGCTCAACCTTCAAACCGATTAATTTGGCAATTGGATTACAAGCC
AAAGCCTTTACGGTCAATAGTGTGGTTGATGACCCTGGGTTTATTGCCCGTGCGCCTGGCTGCTGCGCCAACTTTGATTC
CAATGGCCATTCGCCGATGACTCCCGAAAATGTGATTTTGTATTCATCGAATGTGGGAGCCTTGCAATATGCCGAAATGG
CGGGCGATCAAGCCTTCTATCAAGGCTTGCATGATTTTGGCTATGGCGAGCCAACTGGAATTGAGTTGGGTGGCGAAGAG
GCTGGGATTGTGCAATGGCCTGAATCAACCGCTGATTGGCGGCCAATCGTGCTTTCAACCAATGGCTACGGCCAAGGGAT
TGCCGTCACGCCGCTGCAACATGTGCGGGCGATGTCGGCGCTTGCCAATGGTGGCAACTTGATGCAGCCCTACATAATTC
AAGAATGGTGTGAGCGCGGCGAGTGTCACAAGGTTGAGCCAAAAGTGTTGCGCAAAGTCATCGATGCTGATGTTGCGATG
GATGTGGCCAAAATGATGGTGCGAGCGGCCAACAATAACTATGCGTTTCAAGAAAAGATGTGGTGGACGGCATGTAATGG
CTATTACGATCGCCAAGGCAATGGCGGTGTGCCCTTGGTGCCTGGCTACAATATTGCGGCTAAAACTGGTACAAGCTCAA
TTCCCGATGGCCGTGGTGGCTACGAAAATGCCACGATTGGCTCAGTGATGGGCTTTGGGCCGATTGAAGATGCGCGTTTT
ACGGTATTGGTCAAGCTTGATCGTACCCAGGATATTTGGGGCACATCGGCGATTCCAGTCTATGCTGCCGTGTTCAAACG
CTTGCTGACCCATTATCAAATTCCGCCCAACCCTGATTTGGTGCATGAATGCCAAAAAGCCCAATAA

Upstream 100 bases:

>100_bases
AAGCCAAGCCGAATATCTGATTATCGAACTACCACACCATCGTTGGACGGCTCAGGCTCGTTAGCGCCCGTTCCAGCCTT
TGCTGCTTGGAGGAACTTGC

Downstream 100 bases:

>100_bases
GCAATGAATTAGCGCCATGCAACCCATGGCTTTGAGATAGGCCTATGCTAACCTTACAAACGGTCGTTGATGGGGTGAAA
ATTGCCAGCGAACCACGCCT

Product: peptidoglycan glycosyltransferase

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MASRTAPTPQNPPLLSRWRINAILLICVVFALANAHKLFEVQIQRHDQLSGLAQSEFRQNRTIQPARGIIRDSTGSVLAM
NVDRDTLGVAPPYIDDDPTDPNESDRLALLLSPLIGKAPSEIKQLLLTKNREYVVLARRLTPEVSEQIRALKNTALTLNP
EPVRVYPKGTFAANVVGVANYENVGISGVEGYNNSLLAGVAGSLEAEIDSASNSIWIEPPTVQEPRDGADITLTIDPTAQ
HIAEEELQNALVNHGASGGSITVMDSKTGAILAMATSTKFDPNRYTEYQPEIYNKNSVITDQYEPGSTFKPINLAIGLQA
KAFTVNSVVDDPGFIARAPGCCANFDSNGHSPMTPENVILYSSNVGALQYAEMAGDQAFYQGLHDFGYGEPTGIELGGEE
AGIVQWPESTADWRPIVLSTNGYGQGIAVTPLQHVRAMSALANGGNLMQPYIIQEWCERGECHKVEPKVLRKVIDADVAM
DVAKMMVRAANNNYAFQEKMWWTACNGYYDRQGNGGVPLVPGYNIAAKTGTSSIPDGRGGYENATIGSVMGFGPIEDARF
TVLVKLDRTQDIWGTSAIPVYAAVFKRLLTHYQIPPNPDLVHECQKAQ

Sequences:

>Translated_608_residues
MASRTAPTPQNPPLLSRWRINAILLICVVFALANAHKLFEVQIQRHDQLSGLAQSEFRQNRTIQPARGIIRDSTGSVLAM
NVDRDTLGVAPPYIDDDPTDPNESDRLALLLSPLIGKAPSEIKQLLLTKNREYVVLARRLTPEVSEQIRALKNTALTLNP
EPVRVYPKGTFAANVVGVANYENVGISGVEGYNNSLLAGVAGSLEAEIDSASNSIWIEPPTVQEPRDGADITLTIDPTAQ
HIAEEELQNALVNHGASGGSITVMDSKTGAILAMATSTKFDPNRYTEYQPEIYNKNSVITDQYEPGSTFKPINLAIGLQA
KAFTVNSVVDDPGFIARAPGCCANFDSNGHSPMTPENVILYSSNVGALQYAEMAGDQAFYQGLHDFGYGEPTGIELGGEE
AGIVQWPESTADWRPIVLSTNGYGQGIAVTPLQHVRAMSALANGGNLMQPYIIQEWCERGECHKVEPKVLRKVIDADVAM
DVAKMMVRAANNNYAFQEKMWWTACNGYYDRQGNGGVPLVPGYNIAAKTGTSSIPDGRGGYENATIGSVMGFGPIEDARF
TVLVKLDRTQDIWGTSAIPVYAAVFKRLLTHYQIPPNPDLVHECQKAQ
>Mature_607_residues
ASRTAPTPQNPPLLSRWRINAILLICVVFALANAHKLFEVQIQRHDQLSGLAQSEFRQNRTIQPARGIIRDSTGSVLAMN
VDRDTLGVAPPYIDDDPTDPNESDRLALLLSPLIGKAPSEIKQLLLTKNREYVVLARRLTPEVSEQIRALKNTALTLNPE
PVRVYPKGTFAANVVGVANYENVGISGVEGYNNSLLAGVAGSLEAEIDSASNSIWIEPPTVQEPRDGADITLTIDPTAQH
IAEEELQNALVNHGASGGSITVMDSKTGAILAMATSTKFDPNRYTEYQPEIYNKNSVITDQYEPGSTFKPINLAIGLQAK
AFTVNSVVDDPGFIARAPGCCANFDSNGHSPMTPENVILYSSNVGALQYAEMAGDQAFYQGLHDFGYGEPTGIELGGEEA
GIVQWPESTADWRPIVLSTNGYGQGIAVTPLQHVRAMSALANGGNLMQPYIIQEWCERGECHKVEPKVLRKVIDADVAMD
VAKMMVRAANNNYAFQEKMWWTACNGYYDRQGNGGVPLVPGYNIAAKTGTSSIPDGRGGYENATIGSVMGFGPIEDARFT
VLVKLDRTQDIWGTSAIPVYAAVFKRLLTHYQIPPNPDLVHECQKAQ

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

Organism=Escherichia coli, GI1786272, Length=590, Percent_Identity=28.6440677966102, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1786854, Length=497, Percent_Identity=25.1509054325956, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 66043; Mature: 65912

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRTAPTPQNPPLLSRWRINAILLICVVFALANAHKLFEVQIQRHDQLSGLAQSEFRQN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHC
RTIQPARGIIRDSTGSVLAMNVDRDTLGVAPPYIDDDPTDPNESDRLALLLSPLIGKAPS
CCCCHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHH
EIKQLLLTKNREYVVLARRLTPEVSEQIRALKNTALTLNPEPVRVYPKGTFAANVVGVAN
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEECCCEEEEEEEECC
YENVGISGVEGYNNSLLAGVAGSLEAEIDSASNSIWIEPPTVQEPRDGADITLTIDPTAQ
CCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEEECCHHH
HIAEEELQNALVNHGASGGSITVMDSKTGAILAMATSTKFDPNRYTEYQPEIYNKNSVIT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEECCCCEEE
DQYEPGSTFKPINLAIGLQAKAFTVNSVVDDPGFIARAPGCCANFDSNGHSPMTPENVIL
CCCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCEECCCCCEECCCCCCCCCCCCCCEEE
YSSNVGALQYAEMAGDQAFYQGLHDFGYGEPTGIELGGEEAGIVQWPESTADWRPIVLST
EECCCCCEEHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCEEEEEEC
NGYGQGIAVTPLQHVRAMSALANGGNLMQPYIIQEWCERGECHKVEPKVLRKVIDADVAM
CCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DVAKMMVRAANNNYAFQEKMWWTACNGYYDRQGNGGVPLVPGYNIAAKTGTSSIPDGRGG
HHHHHHHHHCCCCCEEHHCEEEEECCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC
YENATIGSVMGFGPIEDARFTVLVKLDRTQDIWGTSAIPVYAAVFKRLLTHYQIPPNPDL
CCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
VHECQKAQ
HHHHHCCC
>Mature Secondary Structure 
ASRTAPTPQNPPLLSRWRINAILLICVVFALANAHKLFEVQIQRHDQLSGLAQSEFRQN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHC
RTIQPARGIIRDSTGSVLAMNVDRDTLGVAPPYIDDDPTDPNESDRLALLLSPLIGKAPS
CCCCHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHH
EIKQLLLTKNREYVVLARRLTPEVSEQIRALKNTALTLNPEPVRVYPKGTFAANVVGVAN
HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCEEEECCCCEEEEECCCEEEEEEEECC
YENVGISGVEGYNNSLLAGVAGSLEAEIDSASNSIWIEPPTVQEPRDGADITLTIDPTAQ
CCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCEEEEEECCHHH
HIAEEELQNALVNHGASGGSITVMDSKTGAILAMATSTKFDPNRYTEYQPEIYNKNSVIT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEECCCCEEE
DQYEPGSTFKPINLAIGLQAKAFTVNSVVDDPGFIARAPGCCANFDSNGHSPMTPENVIL
CCCCCCCCCCCEEEEEECEEEEEEECCCCCCCCCEECCCCCEECCCCCCCCCCCCCCEEE
YSSNVGALQYAEMAGDQAFYQGLHDFGYGEPTGIELGGEEAGIVQWPESTADWRPIVLST
EECCCCCEEHHHHCCCHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCEEEEEEC
NGYGQGIAVTPLQHVRAMSALANGGNLMQPYIIQEWCERGECHKVEPKVLRKVIDADVAM
CCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DVAKMMVRAANNNYAFQEKMWWTACNGYYDRQGNGGVPLVPGYNIAAKTGTSSIPDGRGG
HHHHHHHHHCCCCCEEHHCEEEEECCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC
YENATIGSVMGFGPIEDARFTVLVKLDRTQDIWGTSAIPVYAAVFKRLLTHYQIPPNPDL
CCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
VHECQKAQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]