| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is murC [H]
Identifier: 159900026
GI number: 159900026
Start: 4418723
End: 4420054
Strand: Reverse
Name: murC [H]
Synonym: Haur_3509
Alternate gene names: 159900026
Gene position: 4420054-4418723 (Counterclockwise)
Preceding gene: 159900027
Following gene: 159900025
Centisome position: 69.64
GC content: 55.11
Gene sequence:
>1332_bases GTGCATACGCACATTGTTGGAATTGGTGGTTCAGGCATGAGTTCGATTGCGACGCTGCTGCTGGAGCGTGGCGATCAGGT TTCTGGCTGCGATCGGGCGGCCAATGCGGCTACAACCCGCTTGGCTGACCATGGTGTTTCAGTCGAAATTGGCCATAGCG CGAGCCATGTGCAGGGGATTGATCGGCTGTTGGTGACTTCGGCCTTGCCACTTGACCACATTGAGATTGTGGCGGCTCAC CAAGCGGCGATTCCGGTGCTGACCCGCCATGATTTATGGCGTGAATGGAGCGCTGAACGCCCAACCCTTGCGGTTACTGG AACGCATGGCAAAACCACCACTACCGCAATGTTAGCGGTTATTTTTAAGCATTGTGGCTATACGCCTGGCTTTTTGATTG GAGCCGAAGTGCCAGCCTTAGGCGCGAGTGCCGCTTGGGGTCAAGGGCCATTGGTGCTCGAAGCCGATGAGTATGCCCGC ACGTTTTTGGCCCTGAGTCCAGCAATTGGCATTATCACCAATCTCGATTGGGATCATGTGGATATTTATCCCAGCCAAGC TGAGTATGATGCAGCTTTTCGTGAGTTTGCCATCAAGCCGAGCCTACAACATTTGGTGTTGTGCGGCGATGATCTGGGCA CGCAACGGGTGCTTGCTGATGTGCCAGCGATTCGTTGTGGTTTGACTGAACATAACGATTGGCGAGCAACGGCGGTTCAA GCTACGCCCGATGGCATGCTGTTTGAACTCATCAGCCCTGCTGCTGAGCCAATGACGGTGCAATTAGCGGTTTCTGGTGA ACATAATGTGCGAAATGCTTTGTTGGCCTTAGCCGCTGCCCATTCCTATGGCATTGATTTAGCGGTAGCGGTGGCAGCGA TTGCCCACTATCAAGGGGCAGCGCGACGCTTCGAGCCAAAAGGTCAAGTTGGTGCTGTACGCGTATTCGACGATTATGCA CATCATCCGGTGGAAATTCGTGCGACCTTGGCGGCAGCTCGCAAGCGCTTTCCAGCGCAACGAATTGTGGCCTATTTTCA GCCACATACCTTTAGCCGCTTGGAAGCGTTTCTAGCTGATTTTCAAACTGCTTTTGAGCAGGCGGATCTGGTGCGAATTG GCGCGGTGTATGGGGCACGCGAAACCAGCAAGGGCGACCCAACCGCTCAAATCGTGGCTGGCATGCAACATCCCAATGCC TTGGCAGTCGGCGATTTAGACCAAGCGTTTGAGCAATTGCTGCGCGATGTGCAGGCTGGCGATGTGGTGCTGACCTTGGG AGCTGGCGATGGGGTTGTGGTTGGCGAGCGGTTGGTGGCGGCGCTGAGGTGA
Upstream 100 bases:
>100_bases GCTGCTCGATGTTCGATGTTCTGAAAATCCTTGGGGACGCTGGGAATCGTCGATCTCAGCGTTTCTGCTGTTTTTATCTG GCTTTTTTAAGGAGTCACTG
Downstream 100 bases:
>100_bases TTCGATGATTGCTGATGCTGCCTATCGCCAATTTCATCGTGATGCGGCAGAGCGCTTGCGTCAACTCTACGCTGAACAGA CAGGGCGGCCTGAAGGTTTG
Product: UDP-N-acetylmuramate--alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MHTHIVGIGGSGMSSIATLLLERGDQVSGCDRAANAATTRLADHGVSVEIGHSASHVQGIDRLLVTSALPLDHIEIVAAH QAAIPVLTRHDLWREWSAERPTLAVTGTHGKTTTTAMLAVIFKHCGYTPGFLIGAEVPALGASAAWGQGPLVLEADEYAR TFLALSPAIGIITNLDWDHVDIYPSQAEYDAAFREFAIKPSLQHLVLCGDDLGTQRVLADVPAIRCGLTEHNDWRATAVQ ATPDGMLFELISPAAEPMTVQLAVSGEHNVRNALLALAAAHSYGIDLAVAVAAIAHYQGAARRFEPKGQVGAVRVFDDYA HHPVEIRATLAAARKRFPAQRIVAYFQPHTFSRLEAFLADFQTAFEQADLVRIGAVYGARETSKGDPTAQIVAGMQHPNA LAVGDLDQAFEQLLRDVQAGDVVLTLGAGDGVVVGERLVAALR
Sequences:
>Translated_443_residues MHTHIVGIGGSGMSSIATLLLERGDQVSGCDRAANAATTRLADHGVSVEIGHSASHVQGIDRLLVTSALPLDHIEIVAAH QAAIPVLTRHDLWREWSAERPTLAVTGTHGKTTTTAMLAVIFKHCGYTPGFLIGAEVPALGASAAWGQGPLVLEADEYAR TFLALSPAIGIITNLDWDHVDIYPSQAEYDAAFREFAIKPSLQHLVLCGDDLGTQRVLADVPAIRCGLTEHNDWRATAVQ ATPDGMLFELISPAAEPMTVQLAVSGEHNVRNALLALAAAHSYGIDLAVAVAAIAHYQGAARRFEPKGQVGAVRVFDDYA HHPVEIRATLAAARKRFPAQRIVAYFQPHTFSRLEAFLADFQTAFEQADLVRIGAVYGARETSKGDPTAQIVAGMQHPNA LAVGDLDQAFEQLLRDVQAGDVVLTLGAGDGVVVGERLVAALR >Mature_443_residues MHTHIVGIGGSGMSSIATLLLERGDQVSGCDRAANAATTRLADHGVSVEIGHSASHVQGIDRLLVTSALPLDHIEIVAAH QAAIPVLTRHDLWREWSAERPTLAVTGTHGKTTTTAMLAVIFKHCGYTPGFLIGAEVPALGASAAWGQGPLVLEADEYAR TFLALSPAIGIITNLDWDHVDIYPSQAEYDAAFREFAIKPSLQHLVLCGDDLGTQRVLADVPAIRCGLTEHNDWRATAVQ ATPDGMLFELISPAAEPMTVQLAVSGEHNVRNALLALAAAHSYGIDLAVAVAAIAHYQGAARRFEPKGQVGAVRVFDDYA HHPVEIRATLAAARKRFPAQRIVAYFQPHTFSRLEAFLADFQTAFEQADLVRIGAVYGARETSKGDPTAQIVAGMQHPNA LAVGDLDQAFEQLLRDVQAGDVVLTLGAGDGVVVGERLVAALR
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=447, Percent_Identity=36.0178970917226, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1790680, Length=461, Percent_Identity=28.6334056399132, Blast_Score=162, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 47184; Mature: 47184
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHIVGIGGSGMSSIATLLLERGDQVSGCDRAANAATTRLADHGVSVEIGHSASHVQGI CCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH DRLLVTSALPLDHIEIVAAHQAAIPVLTRHDLWREWSAERPTLAVTGTHGKTTTTAMLAV HHHHHHHCCCCCHHEEEEHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH IFKHCGYTPGFLIGAEVPALGASAAWGQGPLVLEADEYARTFLALSPAIGIITNLDWDHV HHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHEECCCCCCE DIYPSQAEYDAAFREFAIKPSLQHLVLCGDDLGTQRVLADVPAIRCGLTEHNDWRATAVQ EECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCHHEECCCCCCCCEEEEEE ATPDGMLFELISPAAEPMTVQLAVSGEHNVRNALLALAAAHSYGIDLAVAVAAIAHYQGA ECCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ARRFEPKGQVGAVRVFDDYAHHPVEIRATLAAARKRFPAQRIVAYFQPHTFSRLEAFLAD HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH FQTAFEQADLVRIGAVYGARETSKGDPTAQIVAGMQHPNALAVGDLDQAFEQLLRDVQAG HHHHHHHCCEEEEEHHHCCCCCCCCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCC DVVLTLGAGDGVVVGERLVAALR CEEEEEECCCCEEHHHHHHHHCC >Mature Secondary Structure MHTHIVGIGGSGMSSIATLLLERGDQVSGCDRAANAATTRLADHGVSVEIGHSASHVQGI CCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHH DRLLVTSALPLDHIEIVAAHQAAIPVLTRHDLWREWSAERPTLAVTGTHGKTTTTAMLAV HHHHHHHCCCCCHHEEEEHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH IFKHCGYTPGFLIGAEVPALGASAAWGQGPLVLEADEYARTFLALSPAIGIITNLDWDHV HHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHEECCCCCCE DIYPSQAEYDAAFREFAIKPSLQHLVLCGDDLGTQRVLADVPAIRCGLTEHNDWRATAVQ EECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCHHEECCCCCCCCEEEEEE ATPDGMLFELISPAAEPMTVQLAVSGEHNVRNALLALAAAHSYGIDLAVAVAAIAHYQGA ECCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ARRFEPKGQVGAVRVFDDYAHHPVEIRATLAAARKRFPAQRIVAYFQPHTFSRLEAFLAD HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH FQTAFEQADLVRIGAVYGARETSKGDPTAQIVAGMQHPNALAVGDLDQAFEQLLRDVQAG HHHHHHHCCEEEEEHHHCCCCCCCCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCC DVVLTLGAGDGVVVGERLVAALR CEEEEEECCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA