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The map label for this gene is 159900025

Identifier: 159900025

GI number: 159900025

Start: 4417438

End: 4418718

Strand: Reverse

Name: 159900025

Synonym: Haur_3508

Alternate gene names: NA

Gene position: 4418718-4417438 (Counterclockwise)

Preceding gene: 159900026

Following gene: 159900024

Centisome position: 69.62

GC content: 52.54

Gene sequence:

>1281_bases
ATGATTGCTGATGCTGCCTATCGCCAATTTCATCGTGATGCGGCAGAGCGCTTGCGTCAACTCTACGCTGAACAGACAGG
GCGGCCTGAAGGTTTGGATGGAATTATGGCATGGCATTTAGCATTGGCCTGTGAATGGCCCGCCGCAATTACGGCTGCGC
TTGATCAAGCAGAAACGGTGATTGCTCAACATAATATTGCTGATGCGCGAGTTTGGTGTGAACGGGCCTTGGAATATCTG
AACCGTTTGGCCGAGGAGCAACGCGCTAATTTTGCGATTCGGGCCTACAGCTTGGCTTGGACGGTGCTGGATTGGGCGGG
CAATCACGATGATGCCTTGTTTTACGCTCAGCAATTGTTGACCTTAGCCCGCGCCGCGCAATCGGTGCAAATTGAGGGTG
GTTCGTTGGTGGCCTTGGGGCGTTCGCAACGAGCAATCCGCGATTATAGCAGCGCCGAGCAAACATTAAAACGGGCGCTC
GATTTGGCTCGAACTACCAACAATGTGCCGCTTGAGGCCGAAGCTTTGTTGCATCTTGGTAAAACTGAGCAACTCCAAGG
CCACCATACCGCAGCAATTCACCTCTATAACGCCGCACAAGCACGCGGAGCGGTGATTGACGATCGGCTAACAATCGCTA
AAATTATCACAAGCATTGGTGATGTGTATCGGTTGATTGGTTCCGGCCAACAAGCAGCCGATTACTACTCACGCGCCTTA
GAAATCGAGGAACATCTGCCTGGCACGTTGGGCGTGGCGATTGTTCATGAAAAATTGGCGCTTTCGTATCTCGAATTAAA
CGATTTGGATCAAGCGCTGCGTTGCCAAGCTGAAAGCCTGATGCTGCGCGAAAAATTAAACGATGCGGTTGGCACCGCCC
GCGCCTACACCGTGCTTGGGGTGATTCACCATGCCCGCGGCGATTATCAAACGGCGATTGAGTCGTTGCTCAAAGCCTTG
CAATATGAGGATCGGCGCACGCCTGGAGTTGGCCAGATTATGCTGCACAATCGCTTGGGCGATGCCTATCGGGCGCAAGC
TGATTATGGCTCGGCCAGCACCAACTACAATATTGCCCTGACTAATGCCCAACAATTGGGCGATACAGTCGGGATTGCCT
TGGCCAGCGAGCGTTTGGGCGATTTGGCCTATGAGTGGAATGATCGCCATGATGCGGCCAAGCATTGGCATACGGCCTTT
TTATTGCGCCAAGGTCTTGGCCATTACGATGAACAAAAACGCTTGCGTGAACGCTTGCGAACTATAGGAATACAGGTTTA
A

Upstream 100 bases:

>100_bases
TTGCTGCGCGATGTGCAGGCTGGCGATGTGGTGCTGACCTTGGGAGCTGGCGATGGGGTTGTGGTTGGCGAGCGGTTGGT
GGCGGCGCTGAGGTGATTCG

Downstream 100 bases:

>100_bases
GCATGATCGATCTTCGCGAACATGAGCTACTCGCGCCCTACACAGCTTGGCGCATTGGTGGCCCTGCGCGGTATTTTGTA
AACGTTACCAGCCCTGAGCA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; SLEI Family; Histidine Kinase; NB-ARC Domain-Containing Protein; Diguanylate Cyclase/Serine/Threonine Protein Kinase; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Signal Transduction Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIADAAYRQFHRDAAERLRQLYAEQTGRPEGLDGIMAWHLALACEWPAAITAALDQAETVIAQHNIADARVWCERALEYL
NRLAEEQRANFAIRAYSLAWTVLDWAGNHDDALFYAQQLLTLARAAQSVQIEGGSLVALGRSQRAIRDYSSAEQTLKRAL
DLARTTNNVPLEAEALLHLGKTEQLQGHHTAAIHLYNAAQARGAVIDDRLTIAKIITSIGDVYRLIGSGQQAADYYSRAL
EIEEHLPGTLGVAIVHEKLALSYLELNDLDQALRCQAESLMLREKLNDAVGTARAYTVLGVIHHARGDYQTAIESLLKAL
QYEDRRTPGVGQIMLHNRLGDAYRAQADYGSASTNYNIALTNAQQLGDTVGIALASERLGDLAYEWNDRHDAAKHWHTAF
LLRQGLGHYDEQKRLRERLRTIGIQV

Sequences:

>Translated_426_residues
MIADAAYRQFHRDAAERLRQLYAEQTGRPEGLDGIMAWHLALACEWPAAITAALDQAETVIAQHNIADARVWCERALEYL
NRLAEEQRANFAIRAYSLAWTVLDWAGNHDDALFYAQQLLTLARAAQSVQIEGGSLVALGRSQRAIRDYSSAEQTLKRAL
DLARTTNNVPLEAEALLHLGKTEQLQGHHTAAIHLYNAAQARGAVIDDRLTIAKIITSIGDVYRLIGSGQQAADYYSRAL
EIEEHLPGTLGVAIVHEKLALSYLELNDLDQALRCQAESLMLREKLNDAVGTARAYTVLGVIHHARGDYQTAIESLLKAL
QYEDRRTPGVGQIMLHNRLGDAYRAQADYGSASTNYNIALTNAQQLGDTVGIALASERLGDLAYEWNDRHDAAKHWHTAF
LLRQGLGHYDEQKRLRERLRTIGIQV
>Mature_426_residues
MIADAAYRQFHRDAAERLRQLYAEQTGRPEGLDGIMAWHLALACEWPAAITAALDQAETVIAQHNIADARVWCERALEYL
NRLAEEQRANFAIRAYSLAWTVLDWAGNHDDALFYAQQLLTLARAAQSVQIEGGSLVALGRSQRAIRDYSSAEQTLKRAL
DLARTTNNVPLEAEALLHLGKTEQLQGHHTAAIHLYNAAQARGAVIDDRLTIAKIITSIGDVYRLIGSGQQAADYYSRAL
EIEEHLPGTLGVAIVHEKLALSYLELNDLDQALRCQAESLMLREKLNDAVGTARAYTVLGVIHHARGDYQTAIESLLKAL
QYEDRRTPGVGQIMLHNRLGDAYRAQADYGSASTNYNIALTNAQQLGDTVGIALASERLGDLAYEWNDRHDAAKHWHTAF
LLRQGLGHYDEQKRLRERLRTIGIQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=278, Percent_Identity=28.4172661870504, Blast_Score=84, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47418; Mature: 47418

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADAAYRQFHRDAAERLRQLYAEQTGRPEGLDGIMAWHLALACEWPAAITAALDQAETV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAQHNIADARVWCERALEYLNRLAEEQRANFAIRAYSLAWTVLDWAGNHDDALFYAQQLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHH
TLARAAQSVQIEGGSLVALGRSQRAIRDYSSAEQTLKRALDLARTTNNVPLEAEALLHLG
HHHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
KTEQLQGHHTAAIHLYNAAQARGAVIDDRLTIAKIITSIGDVYRLIGSGQQAADYYSRAL
CCHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EIEEHLPGTLGVAIVHEKLALSYLELNDLDQALRCQAESLMLREKLNDAVGTARAYTVLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIHHARGDYQTAIESLLKALQYEDRRTPGVGQIMLHNRLGDAYRAQADYGSASTNYNIAL
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCCCEEEE
TNAQQLGDTVGIALASERLGDLAYEWNDRHDAAKHWHTAFLLRQGLGHYDEQKRLRERLR
CCHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TIGIQV
HHCCCC
>Mature Secondary Structure
MIADAAYRQFHRDAAERLRQLYAEQTGRPEGLDGIMAWHLALACEWPAAITAALDQAETV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAQHNIADARVWCERALEYLNRLAEEQRANFAIRAYSLAWTVLDWAGNHDDALFYAQQLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHH
TLARAAQSVQIEGGSLVALGRSQRAIRDYSSAEQTLKRALDLARTTNNVPLEAEALLHLG
HHHHHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
KTEQLQGHHTAAIHLYNAAQARGAVIDDRLTIAKIITSIGDVYRLIGSGQQAADYYSRAL
CCHHCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EIEEHLPGTLGVAIVHEKLALSYLELNDLDQALRCQAESLMLREKLNDAVGTARAYTVLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIHHARGDYQTAIESLLKALQYEDRRTPGVGQIMLHNRLGDAYRAQADYGSASTNYNIAL
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCCCEEEE
TNAQQLGDTVGIALASERLGDLAYEWNDRHDAAKHWHTAFLLRQGLGHYDEQKRLRERLR
CCHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TIGIQV
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA