Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900012

Identifier: 159900012

GI number: 159900012

Start: 4401828

End: 4402769

Strand: Reverse

Name: 159900012

Synonym: Haur_3495

Alternate gene names: NA

Gene position: 4402769-4401828 (Counterclockwise)

Preceding gene: 159900013

Following gene: 159900011

Centisome position: 69.37

GC content: 51.91

Gene sequence:

>942_bases
ATGCGCTTACTACTTGGAATCTTATTGCTAAACTTAGTGTGGTGTAGCTACCGCCCCCAAGAACGCCAAATTCTCTGGGG
GTGGTTTTTGCGTATCTGGCCACGGGTTCGACCAATATTGGGCTGGTTTTTGATTTTTATCGGCATCTTGGGTGTGATTC
TGCCAATTCTCCAAGGGATTATCTTCTTGGTGATTGGCTCGGCCTTGATTGGCCCACGCCATCGGCTGATTCGCCGAACG
CGAGTAGCTTATAAACAGGTTTTGCATCGTTTGGCTGGTTCGTCCAATCGATTTTTGGCATGGCTGGGGCGCTTTGGTAT
CAGCTCGTTGCGCACCATGAACCAGCAAATTCGGCGTTTTATGGAATATCGCACGCGCTATCAGCGCAAGCATCGGCCAA
TTCGCTTGGCAATTGTGCCGCCGCCCGATGTAGTGGCAATGCTTGATCACTATCGCCAGCGCTACGATCCGAGTTATCGC
CATGGCTTGCCGCCGCATATCGTGCTTGTGCCAAGCAGCCATCCCAGCGATCGTGATGATTTTGAGCGAGCGGTGGCAAC
CACCTTGAGCCAATGGTCGAGTTTTGATCTGACCCTTGAGCACTTGCAAATTGCCCCAAATCAGCATCGTTTGGTGCTGC
TCCCTAGCCAAGGCAAAAACTTGCTCGAACAACTCCAAGCGAGCTTGCCGCAAACGCGCCCAATCAAACGCCAGCCATGG
CCAGCCTTAACGATTGGCAAATTGCTGCAATATAGCAGTTTGGCGAGCGCTCAAACCTGGGTCGCCGAAACCTGGCAACC
ACAACGCTGGCATGTAGCTGAATTGGTCTTGTTTGAAGAACGTTTTGGCCGGATGTGGCACGAAGTACGGCGTTTTCGTT
TGGGCGCTCGCACGAACCATGCGGAGTGTGTTAAGATACATGCACTTAACGATTATGCCTAA

Upstream 100 bases:

>100_bases
CCAATTACTTGGAATGTGGGTGCTTGGCAACGCTAGCGGCGCAGATTTTGCTTAATCGCGCTGATGACTACTGACGATCA
ACGTGGATCAAACTGAAATT

Downstream 100 bases:

>100_bases
AGCAGCGTTGCTTTACACTCACTGCCGAGGAGTTTTACGATGATTGAAACCACAATGGCAACCGCCCAGCGCCAATTTGA
TATTGCCGCTGAATTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT
RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR
HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW
PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA

Sequences:

>Translated_313_residues
MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT
RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR
HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW
PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA
>Mature_313_residues
MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT
RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR
HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW
PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36845; Mature: 36845

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGI
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLVIGSALIGPRHRLIRRTRVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYRHGLPPHIVLVPSSHPSDRDD
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH
FERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW
HHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AECVKIHALNDYA
CCEEEEEECCCCC
>Mature Secondary Structure
MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGI
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLVIGSALIGPRHRLIRRTRVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYRHGLPPHIVLVPSSHPSDRDD
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH
FERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW
HHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AECVKIHALNDYA
CCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA