| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899973
Identifier: 159899973
GI number: 159899973
Start: 4345391
End: 4346467
Strand: Reverse
Name: 159899973
Synonym: Haur_3456
Alternate gene names: NA
Gene position: 4346467-4345391 (Counterclockwise)
Preceding gene: 159899974
Following gene: 159899972
Centisome position: 68.49
GC content: 50.42
Gene sequence:
>1077_bases GTGGCTGAATTCCCCACCTTGCAACTCCACCGCCAAAGTTTGCTGAATGCGTTTCGCGATGTACAAGCCAAAGGCCTCGA TACACTACGAGCCTATGAATGGGTTAAACTCGCTCGTTGTGCCTACTATTTGCGTGATCCACTGGCCTCAACCTATTTGC AGCAAGCGGCAGCCCAGCAAGCTATCCCGATGGAGTTTCAAATTGCTAGCTTAAATTTCTATCGGATGGCTGGCGACCAA GCGGCGCTGCAGGCTTGTTTTCGCCAGCTGCCAACCAAACCTGCTGGCTCAGGCCAATGGGCGCAAGCAACCTATCAATG GGCCTACTTTCAAGCGCTATTTTGGCTGGGCGATGATCGCGAATGTATCAAGCGCTACCACCATGAAGCTTCGCTGCAAA CGATCGCATTAGCCAAAATCTTAGCGCAATTGGCTGAAGCCCGCTTAAATCGCAATGCCAGCCAAGCTTTGGCTGTGGCC CAACGCCTCGCTGAGGCCATTCGCGAGGAGCGGCTTGAGCCATGGAGCAATCTGCCGCTAAATCTGTGGGATTTGTATGA GCTTAGTTGTCAGCTCCTCGACCCACCGCTGAGCATCGATGCCGCCTTGATTCAAGCAACCGTTAGCCCAGCCCAACGTT TGCTTGAGCTATTGCAAGCCGAGCAGATTGTTGCACTCGAATGGGCAATTTACAACAATGACGATGAGGCTGATATTGGC TATCGCAACTATACCCTCGCCGATGGCACGACTACATCGTTCGGCACAGGCTTTGTCAACCAAGAATTAGAGCGTATGGT TTGGGACATTATGAATGTTGATTGGGGTGTTCATATAGACCCCAATCAACAATTTGGAATTTATCGGCTTGAAGTGGCGA AGGCGGTGGTGCAGTATATGGGCGAGCTTTGGACAAGCTATGATTTTGAGGAAATGGAAGCAGACGGCTCGATTAATGAG ACGTATTTGGTCGTTCAGCATCCTACTGACCCCGAATTGTATATGATGTATTTGCCAGAAGTACAACGCCAAACTGTCGA TTTAGCGCGTTGGAATGGGCAGAAACGAAGGTATTGA
Upstream 100 bases:
>100_bases TGCCGCACAATACAAATCGTATCTTTTTGGTATATGTGACAGCGGTTGACACAAGCTCTTGCTATAGCTAGAACGATTGA TCTAGCGAGAGTATCGAATT
Downstream 100 bases:
>100_bases TGTCGCATCCCTATTATCACGCTCGCAGTGCGGCCCAACGTTGGGGTGGTGTGTGGCAAGATTATTGGCCGATTGAACAT TGGTTTGATAGCAGCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MAEFPTLQLHRQSLLNAFRDVQAKGLDTLRAYEWVKLARCAYYLRDPLASTYLQQAAAQQAIPMEFQIASLNFYRMAGDQ AALQACFRQLPTKPAGSGQWAQATYQWAYFQALFWLGDDRECIKRYHHEASLQTIALAKILAQLAEARLNRNASQALAVA QRLAEAIREERLEPWSNLPLNLWDLYELSCQLLDPPLSIDAALIQATVSPAQRLLELLQAEQIVALEWAIYNNDDEADIG YRNYTLADGTTTSFGTGFVNQELERMVWDIMNVDWGVHIDPNQQFGIYRLEVAKAVVQYMGELWTSYDFEEMEADGSINE TYLVVQHPTDPELYMMYLPEVQRQTVDLARWNGQKRRY
Sequences:
>Translated_358_residues MAEFPTLQLHRQSLLNAFRDVQAKGLDTLRAYEWVKLARCAYYLRDPLASTYLQQAAAQQAIPMEFQIASLNFYRMAGDQ AALQACFRQLPTKPAGSGQWAQATYQWAYFQALFWLGDDRECIKRYHHEASLQTIALAKILAQLAEARLNRNASQALAVA QRLAEAIREERLEPWSNLPLNLWDLYELSCQLLDPPLSIDAALIQATVSPAQRLLELLQAEQIVALEWAIYNNDDEADIG YRNYTLADGTTTSFGTGFVNQELERMVWDIMNVDWGVHIDPNQQFGIYRLEVAKAVVQYMGELWTSYDFEEMEADGSINE TYLVVQHPTDPELYMMYLPEVQRQTVDLARWNGQKRRY >Mature_357_residues AEFPTLQLHRQSLLNAFRDVQAKGLDTLRAYEWVKLARCAYYLRDPLASTYLQQAAAQQAIPMEFQIASLNFYRMAGDQA ALQACFRQLPTKPAGSGQWAQATYQWAYFQALFWLGDDRECIKRYHHEASLQTIALAKILAQLAEARLNRNASQALAVAQ RLAEAIREERLEPWSNLPLNLWDLYELSCQLLDPPLSIDAALIQATVSPAQRLLELLQAEQIVALEWAIYNNDDEADIGY RNYTLADGTTTSFGTGFVNQELERMVWDIMNVDWGVHIDPNQQFGIYRLEVAKAVVQYMGELWTSYDFEEMEADGSINET YLVVQHPTDPELYMMYLPEVQRQTVDLARWNGQKRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41179; Mature: 41048
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFPTLQLHRQSLLNAFRDVQAKGLDTLRAYEWVKLARCAYYLRDPLASTYLQQAAAQQ CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPMEFQIASLNFYRMAGDQAALQACFRQLPTKPAGSGQWAQATYQWAYFQALFWLGDDR CCCCEEEEECEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH ECIKRYHHEASLQTIALAKILAQLAEARLNRNASQALAVAQRLAEAIREERLEPWSNLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC NLWDLYELSCQLLDPPLSIDAALIQATVSPAQRLLELLQAEQIVALEWAIYNNDDEADIG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCC YRNYTLADGTTTSFGTGFVNQELERMVWDIMNVDWGVHIDPNQQFGIYRLEVAKAVVQYM CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH GELWTSYDFEEMEADGSINETYLVVQHPTDPELYMMYLPEVQRQTVDLARWNGQKRRY HHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEFPTLQLHRQSLLNAFRDVQAKGLDTLRAYEWVKLARCAYYLRDPLASTYLQQAAAQQ CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPMEFQIASLNFYRMAGDQAALQACFRQLPTKPAGSGQWAQATYQWAYFQALFWLGDDR CCCCEEEEECEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH ECIKRYHHEASLQTIALAKILAQLAEARLNRNASQALAVAQRLAEAIREERLEPWSNLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC NLWDLYELSCQLLDPPLSIDAALIQATVSPAQRLLELLQAEQIVALEWAIYNNDDEADIG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCC YRNYTLADGTTTSFGTGFVNQELERMVWDIMNVDWGVHIDPNQQFGIYRLEVAKAVVQYM CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH GELWTSYDFEEMEADGSINETYLVVQHPTDPELYMMYLPEVQRQTVDLARWNGQKRRY HHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA