| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899974
Identifier: 159899974
GI number: 159899974
Start: 4346603
End: 4348459
Strand: Reverse
Name: 159899974
Synonym: Haur_3457
Alternate gene names: NA
Gene position: 4348459-4346603 (Counterclockwise)
Preceding gene: 159899975
Following gene: 159899973
Centisome position: 68.52
GC content: 49.11
Gene sequence:
>1857_bases ATGCGACAATTATTTGGATGTCTTTGCATCCTGATCGTGGTGCTGAGTTTCAGTTTTTCCCCGCGCCAGCCAGCCCAAGC GGCTCCGATGATCGAGTATCGTGATCCTGCTCCCTTTTCTAAAGCGGTAAAACCCACCAACACGATCGCGATTCGCTTAG GGCCAAGCCTGACCAAAGCCGCCGTTGCAACCGTAGAATTTCAGGTTGTTGGCTCACGCAGTGGTTTGCATGCAGGCGAC GTTGTGCTAGCCGAGGATCAACGCACGGTTATTTTTAAGCCAGCCAGCCCATTTGTGTTTGGCGAAACCGTGCGCGTATC GATTAAAAGCAGCGATATTGCCGAGCTTGATCAGCAAACATGGTCGTTTGAAGTAGTTGAGCGCTTGGTTAAACAAACTG ATCAGGTCAAGCAACTGCAAACTGAGCTTGCCGCCGAATTGGCTACTCAAGCTAAAGCAGCACAACCAAGTGGTAGCAGC CCGGTCTTGCGCACTGTGCCCTTTAATCTGCCGCCGTTGACGGTTACGCTAGCGATTAGCAATACCCCTGGCTATATTTT TGTTAGTCCATTTAGCTGGATCAGCAATGTCACGCCCAATCGCTATTTAATGATGGTTGATAACACTGGTGCGCCAATCT ACTACAAGGGGCTAGGTAGTGGCCGCTTTTCACTCGATTTTCGCAAAATTGCCGAGGATAAACTGGTCTATTTCGATACC AGTACCCTCAGCTACCACGTGATGAATCAGCAATACCAAGAGCTTGGCCAATATCGGGCTGGCAATGGCTATCAGATCGA TTTTCATGAATTTTTGATGCTGCCAAATGGCCATGTCATTTTTATGATCTACGATGATATTCCCTATGATTTAAGCCCTT ACGGCGGCGAAGAGAATGCCATCCTGACCGAATTGGTGTTGCAAGAGCTGGATACTGCTGGTAACGTCGTCTTCCAATGG CGCTCGACTGAGCATATTCCAGTTTATGATAGTAGCCATAGTTTGGCTGGAACGGCTCCGGTCGATTATATTCATGGCAA TGCGATTGATGTTGATACCGATGGTCATTGGCTGGTTTCAAGCCGCCATACCGACGAAATTACCAAGATTAATCGCCAAA CGGGCGCGGTTATTTGGCGCTTAGGTGGCGAGGGCAATCAATTTCTCTATTTGGAAGATAGCCCGCGATTCTACCATCAG CATGATATTCGGCGCTTGGCCAATGGCAATATTATGTTGTATAACAATTGGAACACCTTGCCCCGCTCGCCGGATTCGTT CTCGGCGGCGCTGGAATATGAGATCGATGAAGTTGCGAAAACTGTGCGTTTGGTTAAGCGCTATCGGGCAACTCCCGACT ATTTTGCCACAGCGATGGGCAATGCGCAACGCCTGCCCAACGGCAATACTGGCATCGGCTGGGGCAGCATTCAGCCCTTG TATACCGAATTCAACTCTCAAGGCCAAGCAGTTTTTGAATTAACTGCGGCGGCACCGATGGTGAGTTATCGCTCGATGCG CTTTGAATGGCAAGGTGACCCACCATGGCCGCCAACTTTAGTGACCCAAAGCCTTGCTAACACCACCAACTTATACTATA GCTGGAATGGTGCGACCGAAGTTGCCGATTATCAGGTGTTTACTGGGGTTACTAGCACAACCTTGAGTTTGCAAAATACC ACACCCAAAACTAGCTTTGAAACCAATACGACGGTGGTTAATAGTGACCATTGTTTTGCCCAAGTCCGTGCCCGTAATAG CCAAGGCACAGTTTTAGGTTCCTCGGAAATTGCCTTCTTGGCCAGCGATACCTGTACTCCTAACCGCATGTATTTGCCAG CCCTAACCACCCAATAA
Upstream 100 bases:
>100_bases CAAACTGCCCTGTTTTTTTATGAGCATCGCCCCTTTGATGCTCGCTTAAACCTTAAGGCAGCCCAGTTGTGGGTTGCTTA GCCTAAGGAGGAAGCTAGCA
Downstream 100 bases:
>100_bases CTGTTTGAATCGCTGTGCGGCACTGTCTTGGGCAGTGCCGCACAATACAAATCGTATCTTTTTGGTATATGTGACAGCGG TTGACACAAGCTCTTGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MRQLFGCLCILIVVLSFSFSPRQPAQAAPMIEYRDPAPFSKAVKPTNTIAIRLGPSLTKAAVATVEFQVVGSRSGLHAGD VVLAEDQRTVIFKPASPFVFGETVRVSIKSSDIAELDQQTWSFEVVERLVKQTDQVKQLQTELAAELATQAKAAQPSGSS PVLRTVPFNLPPLTVTLAISNTPGYIFVSPFSWISNVTPNRYLMMVDNTGAPIYYKGLGSGRFSLDFRKIAEDKLVYFDT STLSYHVMNQQYQELGQYRAGNGYQIDFHEFLMLPNGHVIFMIYDDIPYDLSPYGGEENAILTELVLQELDTAGNVVFQW RSTEHIPVYDSSHSLAGTAPVDYIHGNAIDVDTDGHWLVSSRHTDEITKINRQTGAVIWRLGGEGNQFLYLEDSPRFYHQ HDIRRLANGNIMLYNNWNTLPRSPDSFSAALEYEIDEVAKTVRLVKRYRATPDYFATAMGNAQRLPNGNTGIGWGSIQPL YTEFNSQGQAVFELTAAAPMVSYRSMRFEWQGDPPWPPTLVTQSLANTTNLYYSWNGATEVADYQVFTGVTSTTLSLQNT TPKTSFETNTTVVNSDHCFAQVRARNSQGTVLGSSEIAFLASDTCTPNRMYLPALTTQ
Sequences:
>Translated_618_residues MRQLFGCLCILIVVLSFSFSPRQPAQAAPMIEYRDPAPFSKAVKPTNTIAIRLGPSLTKAAVATVEFQVVGSRSGLHAGD VVLAEDQRTVIFKPASPFVFGETVRVSIKSSDIAELDQQTWSFEVVERLVKQTDQVKQLQTELAAELATQAKAAQPSGSS PVLRTVPFNLPPLTVTLAISNTPGYIFVSPFSWISNVTPNRYLMMVDNTGAPIYYKGLGSGRFSLDFRKIAEDKLVYFDT STLSYHVMNQQYQELGQYRAGNGYQIDFHEFLMLPNGHVIFMIYDDIPYDLSPYGGEENAILTELVLQELDTAGNVVFQW RSTEHIPVYDSSHSLAGTAPVDYIHGNAIDVDTDGHWLVSSRHTDEITKINRQTGAVIWRLGGEGNQFLYLEDSPRFYHQ HDIRRLANGNIMLYNNWNTLPRSPDSFSAALEYEIDEVAKTVRLVKRYRATPDYFATAMGNAQRLPNGNTGIGWGSIQPL YTEFNSQGQAVFELTAAAPMVSYRSMRFEWQGDPPWPPTLVTQSLANTTNLYYSWNGATEVADYQVFTGVTSTTLSLQNT TPKTSFETNTTVVNSDHCFAQVRARNSQGTVLGSSEIAFLASDTCTPNRMYLPALTTQ >Mature_618_residues MRQLFGCLCILIVVLSFSFSPRQPAQAAPMIEYRDPAPFSKAVKPTNTIAIRLGPSLTKAAVATVEFQVVGSRSGLHAGD VVLAEDQRTVIFKPASPFVFGETVRVSIKSSDIAELDQQTWSFEVVERLVKQTDQVKQLQTELAAELATQAKAAQPSGSS PVLRTVPFNLPPLTVTLAISNTPGYIFVSPFSWISNVTPNRYLMMVDNTGAPIYYKGLGSGRFSLDFRKIAEDKLVYFDT STLSYHVMNQQYQELGQYRAGNGYQIDFHEFLMLPNGHVIFMIYDDIPYDLSPYGGEENAILTELVLQELDTAGNVVFQW RSTEHIPVYDSSHSLAGTAPVDYIHGNAIDVDTDGHWLVSSRHTDEITKINRQTGAVIWRLGGEGNQFLYLEDSPRFYHQ HDIRRLANGNIMLYNNWNTLPRSPDSFSAALEYEIDEVAKTVRLVKRYRATPDYFATAMGNAQRLPNGNTGIGWGSIQPL YTEFNSQGQAVFELTAAAPMVSYRSMRFEWQGDPPWPPTLVTQSLANTTNLYYSWNGATEVADYQVFTGVTSTTLSLQNT TPKTSFETNTTVVNSDHCFAQVRARNSQGTVLGSSEIAFLASDTCTPNRMYLPALTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68754; Mature: 68754
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLFGCLCILIVVLSFSFSPRQPAQAAPMIEYRDPAPFSKAVKPTNTIAIRLGPSLTKA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEECCCHHHH AVATVEFQVVGSRSGLHAGDVVLAEDQRTVIFKPASPFVFGETVRVSIKSSDIAELDQQT EEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEECCEEEEEECCCCHHHHHHHC WSFEVVERLVKQTDQVKQLQTELAAELATQAKAAQPSGSSPVLRTVPFNLPPLTVTLAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEE NTPGYIFVSPFSWISNVTPNRYLMMVDNTGAPIYYKGLGSGRFSLDFRKIAEDKLVYFDT CCCCEEEECCHHHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEEHHHHHCCCCEEEEEC STLSYHVMNQQYQELGQYRAGNGYQIDFHEFLMLPNGHVIFMIYDDIPYDLSPYGGEENA CCEEEEHHHHHHHHHHHCCCCCCEEEEHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCH ILTELVLQELDTAGNVVFQWRSTEHIPVYDSSHSLAGTAPVDYIHGNAIDVDTDGHWLVS HHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCCEEEE SRHTDEITKINRQTGAVIWRLGGEGNQFLYLEDSPRFYHQHDIRRLANGNIMLYNNWNTL CCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCC PRSPDSFSAALEYEIDEVAKTVRLVKRYRATPDYFATAMGNAQRLPNGNTGIGWGSIQPL CCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHH YTEFNSQGQAVFELTAAAPMVSYRSMRFEWQGDPPWPPTLVTQSLANTTNLYYSWNGATE HHHCCCCCCEEEEEEHHCCHHHHEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCC VADYQVFTGVTSTTLSLQNTTPKTSFETNTTVVNSDHCFAQVRARNSQGTVLGSSEIAFL CCCEEEEECCEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEECCCEEEE ASDTCTPNRMYLPALTTQ EECCCCCCEEEECEECCC >Mature Secondary Structure MRQLFGCLCILIVVLSFSFSPRQPAQAAPMIEYRDPAPFSKAVKPTNTIAIRLGPSLTKA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEEECCCHHHH AVATVEFQVVGSRSGLHAGDVVLAEDQRTVIFKPASPFVFGETVRVSIKSSDIAELDQQT EEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEECCEEEEEECCCCHHHHHHHC WSFEVVERLVKQTDQVKQLQTELAAELATQAKAAQPSGSSPVLRTVPFNLPPLTVTLAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEE NTPGYIFVSPFSWISNVTPNRYLMMVDNTGAPIYYKGLGSGRFSLDFRKIAEDKLVYFDT CCCCEEEECCHHHHHCCCCCEEEEEEECCCCCEEEEECCCCEEEEHHHHHCCCCEEEEEC STLSYHVMNQQYQELGQYRAGNGYQIDFHEFLMLPNGHVIFMIYDDIPYDLSPYGGEENA CCEEEEHHHHHHHHHHHCCCCCCEEEEHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCH ILTELVLQELDTAGNVVFQWRSTEHIPVYDSSHSLAGTAPVDYIHGNAIDVDTDGHWLVS HHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEECCCEEEECCCCCEEEE SRHTDEITKINRQTGAVIWRLGGEGNQFLYLEDSPRFYHQHDIRRLANGNIMLYNNWNTL CCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCC PRSPDSFSAALEYEIDEVAKTVRLVKRYRATPDYFATAMGNAQRLPNGNTGIGWGSIQPL CCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHH YTEFNSQGQAVFELTAAAPMVSYRSMRFEWQGDPPWPPTLVTQSLANTTNLYYSWNGATE HHHCCCCCCEEEEEEHHCCHHHHEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCC VADYQVFTGVTSTTLSLQNTTPKTSFETNTTVVNSDHCFAQVRARNSQGTVLGSSEIAFL CCCEEEEECCEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEECCCEEEE ASDTCTPNRMYLPALTTQ EECCCCCCEEEECEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA