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The map label for this gene is gcvT [H]

Identifier: 159899967

GI number: 159899967

Start: 4338582

End: 4339565

Strand: Reverse

Name: gcvT [H]

Synonym: Haur_3450

Alternate gene names: 159899967

Gene position: 4339565-4338582 (Counterclockwise)

Preceding gene: 159899968

Following gene: 159899956

Centisome position: 68.38

GC content: 51.02

Gene sequence:

>984_bases
ATGAATGAACAAGCCTATCGGGCCGCCAGCGAGCATGCAGTCTATCTTGATCGCTCGTCGGCTGGTTGTATCGAAATTAC
TGGGCGCGATCGTTTGGTCTTGATCAATCGGCTCTCGACCAATGCAGTGCTCAATTTAGCGCTTGGCACTGGCCAAATCA
CCGTGCTAACCACCAATATTGGGCGAATTATCGATTTAATTACGGTGTTTGCAATTGATGATGATACGATTTGGGTGATT
ACCAGTGCCAATCGCGGGGCACAATTAACAACCTATTTTGGCCGCAATAAGTTTTATGGCGACCAATTTAAAGTACGCGA
TGTGACCGAGAGCGTCCATCAGATGCGGGTGTATGGTAGCCAAGCCACCGCAATGCTCGAACGCTTGACCAGCCAAAGCT
TGGAGCACGTCGGTTTATGGCAACACCTCAGCGCTGAAATCGACGGCTGCCCGGTGCGTTTAGCGCGAATTCGCCCGATG
CGTGGCGCTGGCTGGGCGATTTTTGCCGATCTTGCGGCAGCCGATGCCTTGTGTGAAGCCTTCGATGATGCGAATGCCGC
CTTGCTTGATCGCCCAACCTACCACACATTGCGAGTTGAAGCTGGCTATCCGGCGCTGAATGAACTCAACGAGGAATTTA
TTCCGCTTGAAGCTAATTTGTGGGATGCAGTCAGTTTCAACAAAGGTTGTTATATCGGCCAAGAAATTATTGCCCGCATG
GATAGCCGTGGTCGTTTGGCCAAAAAGCTACAAGGTTTAGGCCTAAGCGGCGCAGTTGAAGTGCCCGCAACGCTAACTAA
AAATGGCCAAGATGCTGGTACTTTGACCAGCGTGGTATGGTCGCCAGCCTTGAATCAGTACATTGGTTTGGGCTATGTGC
GCACTGGCCACGAGCTTGGTAGCGAATTGACTATTGGTGAGCAGCAGGCTACCGTGGTTGAATTGCCGTTTATTGCTCAA
ACTGAACCAACGACGGTTGAGTAG

Upstream 100 bases:

>100_bases
GCGCTACTTGGTGGTCGGCGCACAACCCTATGAAGTCTTTGCTGATGTGTTGCAGCAAGCCAACGAGCCACCAGCCAGCA
ACTAGAGGAGGTTGTTAATT

Downstream 100 bases:

>100_bases
GATTGCCTAAGGCTTGGAATGCCCCTCGCCCGCCGTAGTGTGCGAGGGGTTAGGGATAAGGCACAATTTTGTGGGTTCAC
GGATTACGACCCTCTATCTA

Product: glycine cleavage T-protein barrel

Products: NA

Alternate protein names: Glycine cleavage system T protein [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNEQAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRIIDLITVFAIDDDTIWVI
TSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQATAMLERLTSQSLEHVGLWQHLSAEIDGCPVRLARIRPM
RGAGWAIFADLAAADALCEAFDDANAALLDRPTYHTLRVEAGYPALNELNEEFIPLEANLWDAVSFNKGCYIGQEIIARM
DSRGRLAKKLQGLGLSGAVEVPATLTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELGSELTIGEQQATVVELPFIAQ
TEPTTVE

Sequences:

>Translated_327_residues
MNEQAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRIIDLITVFAIDDDTIWVI
TSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQATAMLERLTSQSLEHVGLWQHLSAEIDGCPVRLARIRPM
RGAGWAIFADLAAADALCEAFDDANAALLDRPTYHTLRVEAGYPALNELNEEFIPLEANLWDAVSFNKGCYIGQEIIARM
DSRGRLAKKLQGLGLSGAVEVPATLTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELGSELTIGEQQATVVELPFIAQ
TEPTTVE
>Mature_327_residues
MNEQAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNIGRIIDLITVFAIDDDTIWVI
TSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGSQATAMLERLTSQSLEHVGLWQHLSAEIDGCPVRLARIRPM
RGAGWAIFADLAAADALCEAFDDANAALLDRPTYHTLRVEAGYPALNELNEEFIPLEANLWDAVSFNKGCYIGQEIIARM
DSRGRLAKKLQGLGLSGAVEVPATLTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELGSELTIGEQQATVVELPFIAQ
TEPTTVE

Specific function: The glycine cleavage system catalyzes the degradation of glycine [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcvT family [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013977
- InterPro:   IPR006222
- InterPro:   IPR006223
- InterPro:   IPR022903 [H]

Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C [H]

EC number: =2.1.2.10 [H]

Molecular weight: Translated: 35731; Mature: 35731

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNI
CCCHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCEEEEEEECH
GRIIDLITVFAIDDDTIWVITSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGS
HHHHHHHEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCC
QATAMLERLTSQSLEHVGLWQHLSAEIDGCPVRLARIRPMRGAGWAIFADLAAADALCEA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FDDANAALLDRPTYHTLRVEAGYPALNELNEEFIPLEANLWDAVSFNKGCYIGQEIIARM
HCCCCEEEECCCCEEEEEEECCCCCHHHCCCCEEEEECCCCCCEECCCCCCHHHHHHHHC
DSRGRLAKKLQGLGLSGAVEVPATLTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELG
CCCCHHHHHHHCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHCC
SELTIGEQQATVVELPFIAQTEPTTVE
CCEEECCCCCEEEEECEEECCCCCCCC
>Mature Secondary Structure
MNEQAYRAASEHAVYLDRSSAGCIEITGRDRLVLINRLSTNAVLNLALGTGQITVLTTNI
CCCHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCEEEEEEECH
GRIIDLITVFAIDDDTIWVITSANRGAQLTTYFGRNKFYGDQFKVRDVTESVHQMRVYGS
HHHHHHHEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCC
QATAMLERLTSQSLEHVGLWQHLSAEIDGCPVRLARIRPMRGAGWAIFADLAAADALCEA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FDDANAALLDRPTYHTLRVEAGYPALNELNEEFIPLEANLWDAVSFNKGCYIGQEIIARM
HCCCCEEEECCCCEEEEEEECCCCCHHHCCCCEEEEECCCCCCEECCCCCCHHHHHHHHC
DSRGRLAKKLQGLGLSGAVEVPATLTKNGQDAGTLTSVVWSPALNQYIGLGYVRTGHELG
CCCCHHHHHHHCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHCC
SELTIGEQQATVVELPFIAQTEPTTVE
CCEEECCCCCEEEEECEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA