| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is ywbO [H]
Identifier: 159899968
GI number: 159899968
Start: 4339581
End: 4340186
Strand: Reverse
Name: ywbO [H]
Synonym: Haur_3451
Alternate gene names: 159899968
Gene position: 4340186-4339581 (Counterclockwise)
Preceding gene: 159899970
Following gene: 159899967
Centisome position: 68.39
GC content: 52.48
Gene sequence:
>606_bases ATGTCGGTTAGTGTCGATGTCTGGTCGGATTTTGTTTGCCCCTTTTGTTTTCTTGTTTCAACCAATCTCAAACGCTTGGC TGAAACTCACGATATTCAATTAACTTGGCATGCCTTTGAGTTGCGGCCATTTGGTTCGCCGCCACCCGATGCGCAATATC GCCAGTTTATCGCTGAGAAAACGCCAGCGATGGTGGCAATGGCCAAAACCCAATATGGCGTGGATATTAATCAAGGGCCG TTTGGTATTGATAGCCGTTGGGCGCATCGAGCGGCCAAATGGGCTGAGCAACAAGGCCAAGGCGATGCGTTTGCCCAAGC CGTGCTTTCGGCCTACTGGTTGCAGGCCCAAGATATTAGCCAGCCTGCGGTTTTAGCTGCCTGTGCCGAAGTAGTGGGGC TTGATGCTAGCAATCTCGCTGCCATTCTCGCTGATCCACTGTATGATGCTGCGGTTGAGGAAGATATTGCTTTAGCCCAG CAACTCCGTTTGAGTGGCGTGCCCGCGAGTGTATTTGCCAAGCGCTACTTGGTGGTCGGCGCACAACCCTATGAAGTCTT TGCTGATGTGTTGCAGCAAGCCAACGAGCCACCAGCCAGCAACTAG
Upstream 100 bases:
>100_bases GTCTACCACAATCGGCGGCTCATGGTAGACTGAAAAGGCCGCCAGTTAATCAAGCTTGTTTGGGCTTGGCGGTTGTTCTT GCGCGGAAAGGATTTTGATC
Downstream 100 bases:
>100_bases AGGAGGTTGTTAATTATGAATGAACAAGCCTATCGGGCCGCCAGCGAGCATGCAGTCTATCTTGATCGCTCGTCGGCTGG TTGTATCGAAATTACTGGGC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSVSVDVWSDFVCPFCFLVSTNLKRLAETHDIQLTWHAFELRPFGSPPPDAQYRQFIAEKTPAMVAMAKTQYGVDINQGP FGIDSRWAHRAAKWAEQQGQGDAFAQAVLSAYWLQAQDISQPAVLAACAEVVGLDASNLAAILADPLYDAAVEEDIALAQ QLRLSGVPASVFAKRYLVVGAQPYEVFADVLQQANEPPASN
Sequences:
>Translated_201_residues MSVSVDVWSDFVCPFCFLVSTNLKRLAETHDIQLTWHAFELRPFGSPPPDAQYRQFIAEKTPAMVAMAKTQYGVDINQGP FGIDSRWAHRAAKWAEQQGQGDAFAQAVLSAYWLQAQDISQPAVLAACAEVVGLDASNLAAILADPLYDAAVEEDIALAQ QLRLSGVPASVFAKRYLVVGAQPYEVFADVLQQANEPPASN >Mature_200_residues SVSVDVWSDFVCPFCFLVSTNLKRLAETHDIQLTWHAFELRPFGSPPPDAQYRQFIAEKTPAMVAMAKTQYGVDINQGPF GIDSRWAHRAAKWAEQQGQGDAFAQAVLSAYWLQAQDISQPAVLAACAEVVGLDASNLAAILADPLYDAAVEEDIALAQQ LRLSGVPASVFAKRYLVVGAQPYEVFADVLQQANEPPASN
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 21899; Mature: 21768
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSVDVWSDFVCPFCFLVSTNLKRLAETHDIQLTWHAFELRPFGSPPPDAQYRQFIAEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHC TPAMVAMAKTQYGVDINQGPFGIDSRWAHRAAKWAEQQGQGDAFAQAVLSAYWLQAQDIS CCHHEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC QPAVLAACAEVVGLDASNLAAILADPLYDAAVEEDIALAQQLRLSGVPASVFAKRYLVVG CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AQPYEVFADVLQQANEPPASN CCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SVSVDVWSDFVCPFCFLVSTNLKRLAETHDIQLTWHAFELRPFGSPPPDAQYRQFIAEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHC TPAMVAMAKTQYGVDINQGPFGIDSRWAHRAAKWAEQQGQGDAFAQAVLSAYWLQAQDIS CCHHEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC QPAVLAACAEVVGLDASNLAAILADPLYDAAVEEDIALAQQLRLSGVPASVFAKRYLVVG CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AQPYEVFADVLQQANEPPASN CCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]