| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899947
Identifier: 159899947
GI number: 159899947
Start: 4319362
End: 4319757
Strand: Reverse
Name: 159899947
Synonym: Haur_3430
Alternate gene names: NA
Gene position: 4319757-4319362 (Counterclockwise)
Preceding gene: 159899948
Following gene: 159899946
Centisome position: 68.06
GC content: 54.29
Gene sequence:
>396_bases ATGAGCGCATTCAAGCATCAGCCAACGCGGCATTGGCCTCGGCATATTCAAGCAGTCAGTTGGATTATTCTGATTCAACT GGCTTTGTTTTGCCCAATGGCCTGTATTGCCCATTGCTGGTGGTGGAGTATGCCAAGCCATTCGGCTGGCGCAGCGCAGC ATAGTGCCACGATGTTGGTGTGTGAATTGCATGCTGAACATAGTGATTCTGCGCCGCAGCCAATCCCCCCCTTACCCGCT GGCTTGGCAGCCTTTTACCCAATGGTGCTGTTGCTGCTGGCTGGTTGGGTGCTTGCTTCGCATGGATGGCGAGGTTTTGC CCAGCAGCATGCGCTTTGGTCAACCTATCATCCCCAAATTATCACGCCCCCGCCACGAATTAGCGCATTCGGCTAA
Upstream 100 bases:
>100_bases CGCGCTTATTGGTAACGTTTAAGCGTCCACGCCCAACCTAGCAATAATCGGTTTAATGCCTGATTTGAAGCCATGCAGGC TATGGTATAGTAGCGCCATC
Downstream 100 bases:
>100_bases CTCTTTGTATCCCAATTACGATTAAATTGCATAAGGATGGGTGCTATGAAATACGCTCATTGGCTGTTTGGCTGTGTGCT GCTAGGGCTTGTCTTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSAFKHQPTRHWPRHIQAVSWIILIQLALFCPMACIAHCWWWSMPSHSAGAAQHSATMLVCELHAEHSDSAPQPIPPLPA GLAAFYPMVLLLLAGWVLASHGWRGFAQQHALWSTYHPQIITPPPRISAFG
Sequences:
>Translated_131_residues MSAFKHQPTRHWPRHIQAVSWIILIQLALFCPMACIAHCWWWSMPSHSAGAAQHSATMLVCELHAEHSDSAPQPIPPLPA GLAAFYPMVLLLLAGWVLASHGWRGFAQQHALWSTYHPQIITPPPRISAFG >Mature_130_residues SAFKHQPTRHWPRHIQAVSWIILIQLALFCPMACIAHCWWWSMPSHSAGAAQHSATMLVCELHAEHSDSAPQPIPPLPAG LAAFYPMVLLLLAGWVLASHGWRGFAQQHALWSTYHPQIITPPPRISAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14599; Mature: 14468
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFKHQPTRHWPRHIQAVSWIILIQLALFCPMACIAHCWWWSMPSHSAGAAQHSATMLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH CELHAEHSDSAPQPIPPLPAGLAAFYPMVLLLLAGWVLASHGWRGFAQQHALWSTYHPQI EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE ITPPPRISAFG ECCCCCCCCCC >Mature Secondary Structure SAFKHQPTRHWPRHIQAVSWIILIQLALFCPMACIAHCWWWSMPSHSAGAAQHSATMLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH CELHAEHSDSAPQPIPPLPAGLAAFYPMVLLLLAGWVLASHGWRGFAQQHALWSTYHPQI EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE ITPPPRISAFG ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA