| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899890
Identifier: 159899890
GI number: 159899890
Start: 4253448
End: 4254146
Strand: Reverse
Name: 159899890
Synonym: Haur_3373
Alternate gene names: NA
Gene position: 4254146-4253448 (Counterclockwise)
Preceding gene: 159899893
Following gene: 159899889
Centisome position: 67.03
GC content: 52.22
Gene sequence:
>699_bases ATGGACGCACTCTCTGCAATGATGCAGCTTTGGTTGGGCGGGTTATTGGTCGCGTGGGCACTGGTGTTGCTTGGTGGATT TGTGCTCGGCAAGCCGAATGCTGAGGGCACGCGCCGCATGACGCTGTGGGGGCGTTTGGGGTCATCGGCAATTTTGGTGG TAGCAGCTTGGAGTTGGTGGTGGCAACTGCGTGCGCAGCATAATTTAACTGCCTTGTTACTCGCGCTTGGCATGAGCTTA GGCTTTGTGGGCGATTTATGCATGGCCCAAGTCTTTCCGCTTAAAAATTATGTCTTGGGTGGCATGAGTGCCTTTGGGTT GGGCCATGTGGCTTATATTTGGGCTGGTCTACGCATCGAAAGCTTCAATGTGCTGAGCTGGTTGATTTGGTTGATCGTGG GGGCGCTTGGCTGGTATGTAGTGGTTTGGCACGATAGCTCACGTAGTCGTTTGCATCAAGTTGCCTTGCCCTATGCGTTG TTGCTGGCAAGCACGACAGGCATTGCAACTGGTGTAGCCTTGGAGCAACTGTCAATGCTGACATTTGCCTTCGGCGCAGC GCTGTTTTTGCTCAGCGATTTAATTTTGGCAACCCAATTGTTTAATGATGCCCGTTGGCGCGGAATTGGCGATGTGGTTT GGTTTACCTATGGCCCAGCCCAAGCACTGATTGTCTATAGCATGGCTTGGTTGTTGTAA
Upstream 100 bases:
>100_bases CGTGCAATATACGCAGATAGCGCAGCAATTAGTATAATAGGCCATAAAAGACCCGACAAGGGTGCAAAACTCACATTTTG CAGCCACTATAGGAGCCAGT
Downstream 100 bases:
>100_bases CCAAAGACCTTGATAAGCCATAATTTATGCGCACTAAATAGAGTTTCAAGTAAGATCTTTATCCGATTGATGCCCATCAA TTGTACTTTAGGGGGTGCAG
Product: YhhN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL
Sequences:
>Translated_232_residues MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL >Mature_232_residues MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25460; Mature: 25460
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWW CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHH WQLRAQHNLTALLLALGMSLGFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEE SFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYALLLASTTGIATGVALEQLSML HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHC >Mature Secondary Structure MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWW CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHH WQLRAQHNLTALLLALGMSLGFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEE SFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYALLLASTTGIATGVALEQLSML HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA