| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899889
Identifier: 159899889
GI number: 159899889
Start: 4252251
End: 4253066
Strand: Reverse
Name: 159899889
Synonym: Haur_3372
Alternate gene names: NA
Gene position: 4253066-4252251 (Counterclockwise)
Preceding gene: 159899890
Following gene: 159899888
Centisome position: 67.01
GC content: 52.7
Gene sequence:
>816_bases ATGGCTTTTTCCGCTCGACCGACAGTCGGCATTTTGGGCGCAGGCAAGGTTGGCACGGCCTTGGCCTTGGCCTTACAACG AGCCGATTATTCGATTGTCGGCGTTAGCTCCCGTTCACCTACTTCGGCTCAGGCTTTAGCCCAAAGCCTTGTATGCCCCG TGCTCGTACCCAACCAATTATTTGCCCAAGCTCAATTGATCTTTCTGACGATTCCTGATGATCATTTAGCCACTACCGCC CAAGCCTTGGCTGATGTGCTCGACCATGGCACTGGCATTGTGGTGCATTGTTCAGGAGCCTTGACCAGTGCCGTTTTGCA ACCATTGCAACTGCGTGGTTGGCAGGTTGCTGGTTGCCATCCATTGGCTCCCTTTGCTAGCCGCACAACGCCTTTGCCCC CAGCAATTACCTGGGCAATTGAAGCTGAAGCTGATGTGTATTTAGTGCTGGCGGAATTAGTTCAAGCAGTTGGTGGCACT CCACGCCCAATTCAAGCCGAGCATAAGGTGCTTTATCACAGTGCGGCAGTGCTTTCGGCCAACTATGCCATTATGCTAGC CGCCCGAGCAGTCGATTTATTGCAACTTTGTGGTTGGTCGAGCCAAGAATCATTGCAAGCACTCGTGCCTTTATTGCGCG ATAACGTTGAAAATTTGGCTCGCGTTGGCCTGCCCCAAGCATTAACTGGCCCATTGGCTCGTGGCGATTATGGCACGGTC GAGCGCCATCTCCAAGCCTTAGATGCCAATGCCCCTGATATTGCCAGTTTGTATCGCGCCTGCATCGAGGCGACTCAACC ATTATTAAGAACATAG
Upstream 100 bases:
>100_bases TCAAACACCACTTGGATCGCACCCGACCGAGATGGTAAGTACACAGTGATGTGCTTAGTTGTCCTCGGCTGACGCGATTC GGCGTTGCGGAGGTTTTTTT
Downstream 100 bases:
>100_bases ATGGAATGATTCATTAGATTAACAACAACCAGCATGCCCTCACCCCCTGACCCCCTCTCCCGCACGCGAGGCGAGGGGGA ACCATCCCTCCCCTCGCTCG
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: Cytoplasmic Protein; Pyrroline-5-Carboxylate Reductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain Protein; NADP Oxidoreductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain; Oxidoreductase; Oxidoreductase Domain-Containing Protein; Chalcone/Stilbene Synthase Family Protein; Conserved Alanine And Leucine Rich Protein; Oxidoreductase/Dehydrogenase Rossmann- Like Domain Protein; Pantoate/Beta-Alanine Ligase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAFSARPTVGILGAGKVGTALALALQRADYSIVGVSSRSPTSAQALAQSLVCPVLVPNQLFAQAQLIFLTIPDDHLATTA QALADVLDHGTGIVVHCSGALTSAVLQPLQLRGWQVAGCHPLAPFASRTTPLPPAITWAIEAEADVYLVLAELVQAVGGT PRPIQAEHKVLYHSAAVLSANYAIMLAARAVDLLQLCGWSSQESLQALVPLLRDNVENLARVGLPQALTGPLARGDYGTV ERHLQALDANAPDIASLYRACIEATQPLLRT
Sequences:
>Translated_271_residues MAFSARPTVGILGAGKVGTALALALQRADYSIVGVSSRSPTSAQALAQSLVCPVLVPNQLFAQAQLIFLTIPDDHLATTA QALADVLDHGTGIVVHCSGALTSAVLQPLQLRGWQVAGCHPLAPFASRTTPLPPAITWAIEAEADVYLVLAELVQAVGGT PRPIQAEHKVLYHSAAVLSANYAIMLAARAVDLLQLCGWSSQESLQALVPLLRDNVENLARVGLPQALTGPLARGDYGTV ERHLQALDANAPDIASLYRACIEATQPLLRT >Mature_270_residues AFSARPTVGILGAGKVGTALALALQRADYSIVGVSSRSPTSAQALAQSLVCPVLVPNQLFAQAQLIFLTIPDDHLATTAQ ALADVLDHGTGIVVHCSGALTSAVLQPLQLRGWQVAGCHPLAPFASRTTPLPPAITWAIEAEADVYLVLAELVQAVGGTP RPIQAEHKVLYHSAAVLSANYAIMLAARAVDLLQLCGWSSQESLQALVPLLRDNVENLARVGLPQALTGPLARGDYGTVE RHLQALDANAPDIASLYRACIEATQPLLRT
Specific function: Unknown
COG id: COG5495
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28437; Mature: 28306
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSARPTVGILGAGKVGTALALALQRADYSIVGVSSRSPTSAQALAQSLVCPVLVPNQL CCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHH FAQAQLIFLTIPDDHLATTAQALADVLDHGTGIVVHCSGALTSAVLQPLQLRGWQVAGCH HCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEECCC PLAPFASRTTPLPPAITWAIEAEADVYLVLAELVQAVGGTPRPIQAEHKVLYHSAAVLSA CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC NYAIMLAARAVDLLQLCGWSSQESLQALVPLLRDNVENLARVGLPQALTGPLARGDYGTV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHH ERHLQALDANAPDIASLYRACIEATQPLLRT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFSARPTVGILGAGKVGTALALALQRADYSIVGVSSRSPTSAQALAQSLVCPVLVPNQL CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHH FAQAQLIFLTIPDDHLATTAQALADVLDHGTGIVVHCSGALTSAVLQPLQLRGWQVAGCH HCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEECCC PLAPFASRTTPLPPAITWAIEAEADVYLVLAELVQAVGGTPRPIQAEHKVLYHSAAVLSA CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC NYAIMLAARAVDLLQLCGWSSQESLQALVPLLRDNVENLARVGLPQALTGPLARGDYGTV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHH ERHLQALDANAPDIASLYRACIEATQPLLRT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA