Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899890

Identifier: 159899890

GI number: 159899890

Start: 4253448

End: 4254146

Strand: Reverse

Name: 159899890

Synonym: Haur_3373

Alternate gene names: NA

Gene position: 4254146-4253448 (Counterclockwise)

Preceding gene: 159899893

Following gene: 159899889

Centisome position: 67.03

GC content: 52.22

Gene sequence:

>699_bases
ATGGACGCACTCTCTGCAATGATGCAGCTTTGGTTGGGCGGGTTATTGGTCGCGTGGGCACTGGTGTTGCTTGGTGGATT
TGTGCTCGGCAAGCCGAATGCTGAGGGCACGCGCCGCATGACGCTGTGGGGGCGTTTGGGGTCATCGGCAATTTTGGTGG
TAGCAGCTTGGAGTTGGTGGTGGCAACTGCGTGCGCAGCATAATTTAACTGCCTTGTTACTCGCGCTTGGCATGAGCTTA
GGCTTTGTGGGCGATTTATGCATGGCCCAAGTCTTTCCGCTTAAAAATTATGTCTTGGGTGGCATGAGTGCCTTTGGGTT
GGGCCATGTGGCTTATATTTGGGCTGGTCTACGCATCGAAAGCTTCAATGTGCTGAGCTGGTTGATTTGGTTGATCGTGG
GGGCGCTTGGCTGGTATGTAGTGGTTTGGCACGATAGCTCACGTAGTCGTTTGCATCAAGTTGCCTTGCCCTATGCGTTG
TTGCTGGCAAGCACGACAGGCATTGCAACTGGTGTAGCCTTGGAGCAACTGTCAATGCTGACATTTGCCTTCGGCGCAGC
GCTGTTTTTGCTCAGCGATTTAATTTTGGCAACCCAATTGTTTAATGATGCCCGTTGGCGCGGAATTGGCGATGTGGTTT
GGTTTACCTATGGCCCAGCCCAAGCACTGATTGTCTATAGCATGGCTTGGTTGTTGTAA

Upstream 100 bases:

>100_bases
CGTGCAATATACGCAGATAGCGCAGCAATTAGTATAATAGGCCATAAAAGACCCGACAAGGGTGCAAAACTCACATTTTG
CAGCCACTATAGGAGCCAGT

Downstream 100 bases:

>100_bases
CCAAAGACCTTGATAAGCCATAATTTATGCGCACTAAATAGAGTTTCAAGTAAGATCTTTATCCGATTGATGCCCATCAA
TTGTACTTTAGGGGGTGCAG

Product: YhhN family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL
GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL
LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL

Sequences:

>Translated_232_residues
MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL
GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL
LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL
>Mature_232_residues
MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWWWQLRAQHNLTALLLALGMSL
GFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIESFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYAL
LLASTTGIATGVALEQLSMLTFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25460; Mature: 25460

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWW
CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHH
WQLRAQHNLTALLLALGMSLGFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEE
SFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYALLLASTTGIATGVALEQLSML
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHC
>Mature Secondary Structure
MDALSAMMQLWLGGLLVAWALVLLGGFVLGKPNAEGTRRMTLWGRLGSSAILVVAAWSWW
CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHH
WQLRAQHNLTALLLALGMSLGFVGDLCMAQVFPLKNYVLGGMSAFGLGHVAYIWAGLRIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEE
SFNVLSWLIWLIVGALGWYVVVWHDSSRSRLHQVALPYALLLASTTGIATGVALEQLSML
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
TFAFGAALFLLSDLILATQLFNDARWRGIGDVVWFTYGPAQALIVYSMAWLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA