Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899855

Identifier: 159899855

GI number: 159899855

Start: 4207704

End: 4208591

Strand: Reverse

Name: 159899855

Synonym: Haur_3338

Alternate gene names: NA

Gene position: 4208591-4207704 (Counterclockwise)

Preceding gene: 159899860

Following gene: 159899854

Centisome position: 66.31

GC content: 49.77

Gene sequence:

>888_bases
ATGAAACAGTGGATGAGTCGGATGTTGTTGGGCGTATTAGCAATTGCCTTGAGCGGTTGTGTTGCCTCACAAGTCGAAAC
CACAATCAGCGGTGATGGCAGTGGCACAAATACGTTTAAAGTAGGTATGGATGCCGAAACAATGGCCATGATGGCAAGCA
TGGGTGGCACTGAGGGCGAAGATCCCTTTAAACAAACCAAAGATGATGTTTCAGGTTATCCAGCTGAGTGGAGCGCAACC
ACCAGCGATTGGAAAGAAAAGCTTGGCGAAACCGAGTTCCAAGGCGTGCAGATCAACATGAAATTTGCTAATCTTGCAAC
CTTGAACGAGCAGTTGAGCCAATTTTTGACTGACTCAGGCAGCAGCGATAGCCCAACTGGTCAAGCGCTATCGAATCTTA
AAGTAACCGATGATGGCGAAACCTTCACTGTATCTGGCAATGCCATGGCCACCGATTTGGCTGCGGCTGCCGAGAGCGAA
GGCGCTGGCATGCCTGGCATGGGCGATTCGTTGAAAAAGGCTGTGATCGTTTGGCAAGTAACTTTGCCAGGTGAAGTGAG
CAGCGTTGAGCCAGCCGATATTGCAACCGTCAACGGCAGCACCGTTACTTGGAAAATTCCAGTTGATAAAACTGCTCAAT
ATACCCTTAAGGCCGTTTCAACCAAGAGTGGTGGCGCTGGCGGCAGTAATTTGCCATTGATCCTTGGTGGCGTTGGCTTG
TTGGTAGTCTTGGCAGGCGTTGGCTTCTTCGTGATGAGCCGCCGCAAAGCTGCTCCAGTTGCCGCTGGTTATCAACAATA
TGGTGGTCAAACCTACGACCCCAATGCCCAACAAAATCAACAACAAGGCTATTACGACCCAAACAACGACCCTAACCGCA
AACAATAA

Upstream 100 bases:

>100_bases
TTGCTATCAGGATAGCACAGAACCTTGGTAGACATGGCATATATTGCCATCTATAATCGCAGTATCCTCCGTTAGCCAGT
TTATTGAAGGAGCGAAGCCC

Downstream 100 bases:

>100_bases
GCCAATTTGAAACCTTTTGAGCCAACGCTCCGTCTTTACGGCGGAGTGTTGGCGTTTTAGCTAACAAATTGCGGTACGAT
GATAGTGAGCGATTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKQWMSRMLLGVLAIALSGCVASQVETTISGDGSGTNTFKVGMDAETMAMMASMGGTEGEDPFKQTKDDVSGYPAEWSAT
TSDWKEKLGETEFQGVQINMKFANLATLNEQLSQFLTDSGSSDSPTGQALSNLKVTDDGETFTVSGNAMATDLAAAAESE
GAGMPGMGDSLKKAVIVWQVTLPGEVSSVEPADIATVNGSTVTWKIPVDKTAQYTLKAVSTKSGGAGGSNLPLILGGVGL
LVVLAGVGFFVMSRRKAAPVAAGYQQYGGQTYDPNAQQNQQQGYYDPNNDPNRKQ

Sequences:

>Translated_295_residues
MKQWMSRMLLGVLAIALSGCVASQVETTISGDGSGTNTFKVGMDAETMAMMASMGGTEGEDPFKQTKDDVSGYPAEWSAT
TSDWKEKLGETEFQGVQINMKFANLATLNEQLSQFLTDSGSSDSPTGQALSNLKVTDDGETFTVSGNAMATDLAAAAESE
GAGMPGMGDSLKKAVIVWQVTLPGEVSSVEPADIATVNGSTVTWKIPVDKTAQYTLKAVSTKSGGAGGSNLPLILGGVGL
LVVLAGVGFFVMSRRKAAPVAAGYQQYGGQTYDPNAQQNQQQGYYDPNNDPNRKQ
>Mature_295_residues
MKQWMSRMLLGVLAIALSGCVASQVETTISGDGSGTNTFKVGMDAETMAMMASMGGTEGEDPFKQTKDDVSGYPAEWSAT
TSDWKEKLGETEFQGVQINMKFANLATLNEQLSQFLTDSGSSDSPTGQALSNLKVTDDGETFTVSGNAMATDLAAAAESE
GAGMPGMGDSLKKAVIVWQVTLPGEVSSVEPADIATVNGSTVTWKIPVDKTAQYTLKAVSTKSGGAGGSNLPLILGGVGL
LVVLAGVGFFVMSRRKAAPVAAGYQQYGGQTYDPNAQQNQQQGYYDPNNDPNRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30883; Mature: 30883

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQWMSRMLLGVLAIALSGCVASQVETTISGDGSGTNTFKVGMDAETMAMMASMGGTEGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCC
DPFKQTKDDVSGYPAEWSATTSDWKEKLGETEFQGVQINMKFANLATLNEQLSQFLTDSG
CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
SSDSPTGQALSNLKVTDDGETFTVSGNAMATDLAAAAESEGAGMPGMGDSLKKAVIVWQV
CCCCCCHHHHHCCEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEE
TLPGEVSSVEPADIATVNGSTVTWKIPVDKTAQYTLKAVSTKSGGAGGSNLPLILGGVGL
ECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHH
LVVLAGVGFFVMSRRKAAPVAAGYQQYGGQTYDPNAQQNQQQGYYDPNNDPNRKQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQWMSRMLLGVLAIALSGCVASQVETTISGDGSGTNTFKVGMDAETMAMMASMGGTEGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCC
DPFKQTKDDVSGYPAEWSATTSDWKEKLGETEFQGVQINMKFANLATLNEQLSQFLTDSG
CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
SSDSPTGQALSNLKVTDDGETFTVSGNAMATDLAAAAESEGAGMPGMGDSLKKAVIVWQV
CCCCCCHHHHHCCEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEE
TLPGEVSSVEPADIATVNGSTVTWKIPVDKTAQYTLKAVSTKSGGAGGSNLPLILGGVGL
ECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHH
LVVLAGVGFFVMSRRKAAPVAAGYQQYGGQTYDPNAQQNQQQGYYDPNNDPNRKQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA