Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899854

Identifier: 159899854

GI number: 159899854

Start: 4206472

End: 4207587

Strand: Reverse

Name: 159899854

Synonym: Haur_3337

Alternate gene names: NA

Gene position: 4207587-4206472 (Counterclockwise)

Preceding gene: 159899855

Following gene: 159899851

Centisome position: 66.3

GC content: 50.45

Gene sequence:

>1116_bases
ATGCGTTATTGGTTGTTGCTTCTCGGGCTGGTGTTGTTGAGTGGTTGTGTGAGTCAGCAACAACAAACTGAATTTAATGC
CGATGCCAGCGGTGTTTATGAAATTCGACTAGGGTTTTCGCAACAATTTCTCGATTTTGCTGAGATGGGCGGAAGTGGCG
CAAGCACCGATGTGCTCGATGATGCGCTCAGTGAATTAGGCTCAATCGCCGATTTGCTGCCCGCTGAATGGCAAGCCAGC
AACGAAAATTGGACCAGTGAAGATGGTCAATATCGGGGCACATTAATTCGCATGCAATTTCGCGATCTGGCCATGCTCAA
AGATCAATTGACCAGCAGCGAATTAAACGAACTTTATAGTTTGGTGCGCTTTGAGGATGTAGCAATCGAGCAAAATGGCA
ATGAGGTTCAGCTCAAGGCAACGGTCAAAAATGGTGAAAATTCAATGTTGGGAAGTACAGAATCAGGCGAGCTGTTTGGC
TCAGGCTTGGTTGCTAGCCCCACCACCAGCTGGACAATTCGCTTCCCCGAAGCGATTAGCAGCTGGAACGAGCGCGAAAT
TGCCACGCTCAACGAGCAGCAAACCAGCATCACCTATGATTTTCCCTATCCTTTGAGCCGCGATTATCAGCTTGAAATTG
TGGGGACGCTGAGCGCTGGTGTGCCGCAATGGGCCTTGTGGGGCGTTGGTGGTTTGGTTGGGGTTGGGTTAATCTTGGTC
GGCATCGGCTTTATTTTGAGTCGGCGCAAAACCAATACCCAGCCTTATGATTTGGTGCCTGCTGGCCCAAGTAATGGCGA
GCCAGCCTACCAACCTGGCAGCCAAACCACCCCCTTAGCAACACCCAGCTATCAGCCCAAGCCTGAAAGCTACCAACCAA
ATGATCAGGTTGCCGCCTATCAGCCTAAACCTGAGAGCTACCAACCAAGCGATAGCATTTCGCCGTATGTACCAAAACCT
GCTAGTTATCAAGCGACAATAACCTCAGCTCAAGCCAGCAATAGCTACGAGCAGCCAACCGCATTTGGCTCAGCTCCAAC
TGAATTTGGTGGCCGCACGCCAACTCGTTCGCTGGGAAGTTGGCAAGATTCCAACGATGATGCTCAAAGTCGATAG

Upstream 100 bases:

>100_bases
TTGAGCCAACGCTCCGTCTTTACGGCGGAGTGTTGGCGTTTTAGCTAACAAATTGCGGTACGATGATAGTGAGCGATTTT
TGATCAACGGAGGCTGCTGT

Downstream 100 bases:

>100_bases
GGCGCATGCGGCGCGGCATTCGGTTTATTCAGCGTTTGAATCTGATTAATCGCTGCCAACGGCCCGATAATCACCAATTG
ATCGCCGCTGCTCAAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS
NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG
SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV
GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP
ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR

Sequences:

>Translated_371_residues
MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS
NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG
SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV
GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP
ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR
>Mature_371_residues
MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS
NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG
SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV
GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP
ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40439; Mature: 40439

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHH
DALSELGSIADLLPAEWQASNENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFGSGLVASPTTSWTIRFPEAIS
HHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHC
SWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV
CCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAY
HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
QPKPESYQPSDSISPYVPKPASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGS
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
WQDSNDDAQSR
CCCCCCCCCCC
>Mature Secondary Structure
MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHH
DALSELGSIADLLPAEWQASNENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFGSGLVASPTTSWTIRFPEAIS
HHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHC
SWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV
CCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAY
HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
QPKPESYQPSDSISPYVPKPASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGS
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
WQDSNDDAQSR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA