| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899854
Identifier: 159899854
GI number: 159899854
Start: 4206472
End: 4207587
Strand: Reverse
Name: 159899854
Synonym: Haur_3337
Alternate gene names: NA
Gene position: 4207587-4206472 (Counterclockwise)
Preceding gene: 159899855
Following gene: 159899851
Centisome position: 66.3
GC content: 50.45
Gene sequence:
>1116_bases ATGCGTTATTGGTTGTTGCTTCTCGGGCTGGTGTTGTTGAGTGGTTGTGTGAGTCAGCAACAACAAACTGAATTTAATGC CGATGCCAGCGGTGTTTATGAAATTCGACTAGGGTTTTCGCAACAATTTCTCGATTTTGCTGAGATGGGCGGAAGTGGCG CAAGCACCGATGTGCTCGATGATGCGCTCAGTGAATTAGGCTCAATCGCCGATTTGCTGCCCGCTGAATGGCAAGCCAGC AACGAAAATTGGACCAGTGAAGATGGTCAATATCGGGGCACATTAATTCGCATGCAATTTCGCGATCTGGCCATGCTCAA AGATCAATTGACCAGCAGCGAATTAAACGAACTTTATAGTTTGGTGCGCTTTGAGGATGTAGCAATCGAGCAAAATGGCA ATGAGGTTCAGCTCAAGGCAACGGTCAAAAATGGTGAAAATTCAATGTTGGGAAGTACAGAATCAGGCGAGCTGTTTGGC TCAGGCTTGGTTGCTAGCCCCACCACCAGCTGGACAATTCGCTTCCCCGAAGCGATTAGCAGCTGGAACGAGCGCGAAAT TGCCACGCTCAACGAGCAGCAAACCAGCATCACCTATGATTTTCCCTATCCTTTGAGCCGCGATTATCAGCTTGAAATTG TGGGGACGCTGAGCGCTGGTGTGCCGCAATGGGCCTTGTGGGGCGTTGGTGGTTTGGTTGGGGTTGGGTTAATCTTGGTC GGCATCGGCTTTATTTTGAGTCGGCGCAAAACCAATACCCAGCCTTATGATTTGGTGCCTGCTGGCCCAAGTAATGGCGA GCCAGCCTACCAACCTGGCAGCCAAACCACCCCCTTAGCAACACCCAGCTATCAGCCCAAGCCTGAAAGCTACCAACCAA ATGATCAGGTTGCCGCCTATCAGCCTAAACCTGAGAGCTACCAACCAAGCGATAGCATTTCGCCGTATGTACCAAAACCT GCTAGTTATCAAGCGACAATAACCTCAGCTCAAGCCAGCAATAGCTACGAGCAGCCAACCGCATTTGGCTCAGCTCCAAC TGAATTTGGTGGCCGCACGCCAACTCGTTCGCTGGGAAGTTGGCAAGATTCCAACGATGATGCTCAAAGTCGATAG
Upstream 100 bases:
>100_bases TTGAGCCAACGCTCCGTCTTTACGGCGGAGTGTTGGCGTTTTAGCTAACAAATTGCGGTACGATGATAGTGAGCGATTTT TGATCAACGGAGGCTGCTGT
Downstream 100 bases:
>100_bases GGCGCATGCGGCGCGGCATTCGGTTTATTCAGCGTTTGAATCTGATTAATCGCTGCCAACGGCCCGATAATCACCAATTG ATCGCCGCTGCTCAAACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR
Sequences:
>Translated_371_residues MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR >Mature_371_residues MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLDDALSELGSIADLLPAEWQAS NENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYSLVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFG SGLVASPTTSWTIRFPEAISSWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAYQPKPESYQPSDSISPYVPKP ASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGSWQDSNDDAQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40439; Mature: 40439
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHH DALSELGSIADLLPAEWQASNENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH LVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFGSGLVASPTTSWTIRFPEAIS HHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHC SWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV CCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAY HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QPKPESYQPSDSISPYVPKPASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGS CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC WQDSNDDAQSR CCCCCCCCCCC >Mature Secondary Structure MRYWLLLLGLVLLSGCVSQQQQTEFNADASGVYEIRLGFSQQFLDFAEMGGSGASTDVLD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHH DALSELGSIADLLPAEWQASNENWTSEDGQYRGTLIRMQFRDLAMLKDQLTSSELNELYS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH LVRFEDVAIEQNGNEVQLKATVKNGENSMLGSTESGELFGSGLVASPTTSWTIRFPEAIS HHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHC SWNEREIATLNEQQTSITYDFPYPLSRDYQLEIVGTLSAGVPQWALWGVGGLVGVGLILV CCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH GIGFILSRRKTNTQPYDLVPAGPSNGEPAYQPGSQTTPLATPSYQPKPESYQPNDQVAAY HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QPKPESYQPSDSISPYVPKPASYQATITSAQASNSYEQPTAFGSAPTEFGGRTPTRSLGS CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC WQDSNDDAQSR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA