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The map label for this gene is atoS [C]

Identifier: 159899811

GI number: 159899811

Start: 4157721

End: 4159799

Strand: Reverse

Name: atoS [C]

Synonym: Haur_3293

Alternate gene names: 159899811

Gene position: 4159799-4157721 (Counterclockwise)

Preceding gene: 159899812

Following gene: 159899806

Centisome position: 65.54

GC content: 48.77

Gene sequence:

>2079_bases
ATGGACCCACACCACGCCAGCGAACAGCCCACCGTTGCCCAGCATGCTAGCCTTGCTCGCCATGAATATGCCGCCGAAGC
TGTTCAGCCCCAGTCTGATCGTGGTGGCTTGCTTGAACAGACGCAAACGATTTTGGGCCAAAACTTGCCCTTGGATATGC
TCTATCGCCAAATTGTGACGGCGATTGCGCGTAGTTTTGCTAATAGCTTAATCAGCATTTACGCCGCCCACACCGATATT
TTGCAACTGCAATGTCAGCATGGCTTTGGGCATAACCCTGAGCAACTGAGTTTCCAACAGGGCATTGTTGGGCGTTGCGC
CCGCACCAAACAAGCTTATTTGATTGCCTATGTTGATCAAGACCCCGATTTTATTCGTAGCCATCCGCATATTCAATCGT
CGATCTGTATTCCACTCTTGGCTGAGCAACAATTGCTCGGGGTATTGATGGTTGAGAGCATTGTGGATACGCTGAATCAA
GCTGATGCGGAAATTTTGGCAAATGTTTGTCAACAACTCAGTAATGCGATTGCTCAAGCAGCGCTTTGGCGACCAAATAG
CCTGATCGATCAACATTATCGGGCGATGCTCGATGCCATGCCTGATGGCATTGTAGTGCAACAGGCGGGCCGAATTGTCT
ATATTAATGCAATTGGGATTGAATTGTTAGGCTTTGAAAATCGTCATCAACTGCTTGGGAGCGATCTCGCAGGCTTGCTC
GAACAAACATCGAATACCATCCAAAAATTATTTGATCAGGCCATTACTACGAATCAAGCGCTGAGCCACGAACTGCAATA
TGATACAACCAAAACGCCAGAAATCCCCCTAAGGTTGACCATTATTCCCATAACTTTTGCTGGTAATACAGCGGTACAGA
TAGTAATTCGCGATCATACGGCCATCCAACAACGTGAAGCTGCCCAACAACTTGCCAACGAACGCGAAAAACGCAAAAGT
CTTGGCCTGCTCGCCGGAGGCATCGCCCACGATTTCAACAATATTTTGATGGGCATTCGTGGCAATGTTAGCCTTGGTTT
GCTCGATCTCATTCCGACCCACCCAATTTATCACCAACTGCAAGAGATCGAAAAGCTCGCAATTCGAGCAACCGAGCTAA
CCCAGCAGATTGTCGCCTACACCGGAGGCAGCCTTTTTGTCAGTAGTACGGTCGATCTGAATGAGCAATTGCGTGAGCTA
ACCACGACGTTTAGTGAGCAGGCCCATCCAACGACCAGCATAACCTATGAGCTTGACGATCAATTAGGGCTACTCAAAGG
CGATGTTAATCAAATCCGCCAAATGATCTTGAGTATCTTCAAAAATAGTGTTGAAGCGATCGAGCATCGCTATGGAGCCA
TTCAGATTACCAGCAAGCTCCAAACCTACACCCAAGCTCCACATACCGCTACTGGCTTACCCAAACTTGCGCCTGGCAGC
TATCTCACCCTGAGTATTCGGGATAATGGTGTTGGTATGGATGCTCGCACCCAACGGCTGATGTTTGATCCCTATTTTAG
TACCAAGTTTACTGGACGCGGCCTTGGTTTAGCCGCTGTTTTGGGTATGGTACGAGCGCATCATGGGTCAATTGCCGTGT
GGAGCCAACCGCAAATGGGAACGGAGGTCACTGTGTTATTACCACCACATTCGATCTTGCAGCCAACCCCCGCAGCGCCG
AACGAGGACGTTCATTCAGTTCATAATGTCGTGATGCTGATCGACGATGAACCAGCAGTTCGCATGGTTACTGAACGCAT
GCTGCAACGTTTAGGCCTAACTGTTCAAGGATTTAGTGATGGTGAGAGTGCGATCAAGGTCTTTCGTGAGCATGCCCATG
AATATCAATTGGTGCTGCTTGATTTGACCATGCCCCAATTTAATGGCATCGATACAGCCCATGGCTTGCGGGCCATTCGC
GCCGATGTGCCAATTGTTTTGATGAGTGGCTATAGTGTCGATTCGATGCTCGACCCACTGTTGAATGATGGTCTGGCGGG
ATTCCTACAAAAACCTTTTACGCTCGGCGATTTGCAACGCACAGTCAATAGCGTTTCGGCCTTGAAAGCACGGAATTGA

Upstream 100 bases:

>100_bases
AAATAAGTCATGGGTAAGACTCACTAAAAGAACTATAGACTGCTAGGAAACGAGCCACTATACTCTGTCGTTGTGTCCCA
TCCTGATCTAGGGAGGACGT

Downstream 100 bases:

>100_bases
GCTTGGGGATCGGGGATCGGGCAACTGATCCCCTTTTTGATCCACGAAGCGCACGAAGGAATGAAACCACGAAGAACGCG
AAGATCGCGAAGGATTATTT

Product: multi-sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MDPHHASEQPTVAQHASLARHEYAAEAVQPQSDRGGLLEQTQTILGQNLPLDMLYRQIVTAIARSFANSLISIYAAHTDI
LQLQCQHGFGHNPEQLSFQQGIVGRCARTKQAYLIAYVDQDPDFIRSHPHIQSSICIPLLAEQQLLGVLMVESIVDTLNQ
ADAEILANVCQQLSNAIAQAALWRPNSLIDQHYRAMLDAMPDGIVVQQAGRIVYINAIGIELLGFENRHQLLGSDLAGLL
EQTSNTIQKLFDQAITTNQALSHELQYDTTKTPEIPLRLTIIPITFAGNTAVQIVIRDHTAIQQREAAQQLANEREKRKS
LGLLAGGIAHDFNNILMGIRGNVSLGLLDLIPTHPIYHQLQEIEKLAIRATELTQQIVAYTGGSLFVSSTVDLNEQLREL
TTTFSEQAHPTTSITYELDDQLGLLKGDVNQIRQMILSIFKNSVEAIEHRYGAIQITSKLQTYTQAPHTATGLPKLAPGS
YLTLSIRDNGVGMDARTQRLMFDPYFSTKFTGRGLGLAAVLGMVRAHHGSIAVWSQPQMGTEVTVLLPPHSILQPTPAAP
NEDVHSVHNVVMLIDDEPAVRMVTERMLQRLGLTVQGFSDGESAIKVFREHAHEYQLVLLDLTMPQFNGIDTAHGLRAIR
ADVPIVLMSGYSVDSMLDPLLNDGLAGFLQKPFTLGDLQRTVNSVSALKARN

Sequences:

>Translated_692_residues
MDPHHASEQPTVAQHASLARHEYAAEAVQPQSDRGGLLEQTQTILGQNLPLDMLYRQIVTAIARSFANSLISIYAAHTDI
LQLQCQHGFGHNPEQLSFQQGIVGRCARTKQAYLIAYVDQDPDFIRSHPHIQSSICIPLLAEQQLLGVLMVESIVDTLNQ
ADAEILANVCQQLSNAIAQAALWRPNSLIDQHYRAMLDAMPDGIVVQQAGRIVYINAIGIELLGFENRHQLLGSDLAGLL
EQTSNTIQKLFDQAITTNQALSHELQYDTTKTPEIPLRLTIIPITFAGNTAVQIVIRDHTAIQQREAAQQLANEREKRKS
LGLLAGGIAHDFNNILMGIRGNVSLGLLDLIPTHPIYHQLQEIEKLAIRATELTQQIVAYTGGSLFVSSTVDLNEQLREL
TTTFSEQAHPTTSITYELDDQLGLLKGDVNQIRQMILSIFKNSVEAIEHRYGAIQITSKLQTYTQAPHTATGLPKLAPGS
YLTLSIRDNGVGMDARTQRLMFDPYFSTKFTGRGLGLAAVLGMVRAHHGSIAVWSQPQMGTEVTVLLPPHSILQPTPAAP
NEDVHSVHNVVMLIDDEPAVRMVTERMLQRLGLTVQGFSDGESAIKVFREHAHEYQLVLLDLTMPQFNGIDTAHGLRAIR
ADVPIVLMSGYSVDSMLDPLLNDGLAGFLQKPFTLGDLQRTVNSVSALKARN
>Mature_692_residues
MDPHHASEQPTVAQHASLARHEYAAEAVQPQSDRGGLLEQTQTILGQNLPLDMLYRQIVTAIARSFANSLISIYAAHTDI
LQLQCQHGFGHNPEQLSFQQGIVGRCARTKQAYLIAYVDQDPDFIRSHPHIQSSICIPLLAEQQLLGVLMVESIVDTLNQ
ADAEILANVCQQLSNAIAQAALWRPNSLIDQHYRAMLDAMPDGIVVQQAGRIVYINAIGIELLGFENRHQLLGSDLAGLL
EQTSNTIQKLFDQAITTNQALSHELQYDTTKTPEIPLRLTIIPITFAGNTAVQIVIRDHTAIQQREAAQQLANEREKRKS
LGLLAGGIAHDFNNILMGIRGNVSLGLLDLIPTHPIYHQLQEIEKLAIRATELTQQIVAYTGGSLFVSSTVDLNEQLREL
TTTFSEQAHPTTSITYELDDQLGLLKGDVNQIRQMILSIFKNSVEAIEHRYGAIQITSKLQTYTQAPHTATGLPKLAPGS
YLTLSIRDNGVGMDARTQRLMFDPYFSTKFTGRGLGLAAVLGMVRAHHGSIAVWSQPQMGTEVTVLLPPHSILQPTPAAP
NEDVHSVHNVVMLIDDEPAVRMVTERMLQRLGLTVQGFSDGESAIKVFREHAHEYQLVLLDLTMPQFNGIDTAHGLRAIR
ADVPIVLMSGYSVDSMLDPLLNDGLAGFLQKPFTLGDLQRTVNSVSALKARN

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=363, Percent_Identity=27.8236914600551, Blast_Score=107, Evalue=4e-24,
Organism=Escherichia coli, GI1790436, Length=249, Percent_Identity=28.1124497991968, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=23.134328358209, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI145693157, Length=289, Percent_Identity=24.5674740484429, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI48994928, Length=330, Percent_Identity=23.030303030303, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788713, Length=264, Percent_Identity=26.1363636363636, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322000, Length=108, Percent_Identity=34.2592592592593, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 76199; Mature: 76199

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPHHASEQPTVAQHASLARHEYAAEAVQPQSDRGGLLEQTQTILGQNLPLDMLYRQIVT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
AIARSFANSLISIYAAHTDILQLQCQHGFGHNPEQLSFQQGIVGRCARTKQAYLIAYVDQ
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC
DPDFIRSHPHIQSSICIPLLAEQQLLGVLMVESIVDTLNQADAEILANVCQQLSNAIAQA
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ALWRPNSLIDQHYRAMLDAMPDGIVVQQAGRIVYINAIGIELLGFENRHQLLGSDLAGLL
HHCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECEEEECCCHHHHHHHHHHHHHH
EQTSNTIQKLFDQAITTNQALSHELQYDTTKTPEIPLRLTIIPITFAGNTAVQIVIRDHT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCH
AIQQREAAQQLANEREKRKSLGLLAGGIAHDFNNILMGIRGNVSLGLLDLIPTHPIYHQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHCCCCHHHHHH
QEIEKLAIRATELTQQIVAYTGGSLFVSSTVDLNEQLRELTTTFSEQAHPTTSITYELDD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
QLGLLKGDVNQIRQMILSIFKNSVEAIEHRYGAIQITSKLQTYTQAPHTATGLPKLAPGS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCC
YLTLSIRDNGVGMDARTQRLMFDPYFSTKFTGRGLGLAAVLGMVRAHHGSIAVWSQPQMG
EEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
TEVTVLLPPHSILQPTPAAPNEDVHSVHNVVMLIDDEPAVRMVTERMLQRLGLTVQGFSD
CEEEEEECCHHHCCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCC
GESAIKVFREHAHEYQLVLLDLTMPQFNGIDTAHGLRAIRADVPIVLMSGYSVDSMLDPL
CHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHH
LNDGLAGFLQKPFTLGDLQRTVNSVSALKARN
HHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPHHASEQPTVAQHASLARHEYAAEAVQPQSDRGGLLEQTQTILGQNLPLDMLYRQIVT
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
AIARSFANSLISIYAAHTDILQLQCQHGFGHNPEQLSFQQGIVGRCARTKQAYLIAYVDQ
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC
DPDFIRSHPHIQSSICIPLLAEQQLLGVLMVESIVDTLNQADAEILANVCQQLSNAIAQA
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ALWRPNSLIDQHYRAMLDAMPDGIVVQQAGRIVYINAIGIELLGFENRHQLLGSDLAGLL
HHCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECEEEECCCHHHHHHHHHHHHHH
EQTSNTIQKLFDQAITTNQALSHELQYDTTKTPEIPLRLTIIPITFAGNTAVQIVIRDHT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCH
AIQQREAAQQLANEREKRKSLGLLAGGIAHDFNNILMGIRGNVSLGLLDLIPTHPIYHQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHCCCCHHHHHH
QEIEKLAIRATELTQQIVAYTGGSLFVSSTVDLNEQLRELTTTFSEQAHPTTSITYELDD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
QLGLLKGDVNQIRQMILSIFKNSVEAIEHRYGAIQITSKLQTYTQAPHTATGLPKLAPGS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCC
YLTLSIRDNGVGMDARTQRLMFDPYFSTKFTGRGLGLAAVLGMVRAHHGSIAVWSQPQMG
EEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
TEVTVLLPPHSILQPTPAAPNEDVHSVHNVVMLIDDEPAVRMVTERMLQRLGLTVQGFSD
CEEEEEECCHHHCCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCC
GESAIKVFREHAHEYQLVLLDLTMPQFNGIDTAHGLRAIRADVPIVLMSGYSVDSMLDPL
CHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHH
LNDGLAGFLQKPFTLGDLQRTVNSVSALKARN
HHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA