Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899806

Identifier: 159899806

GI number: 159899806

Start: 4153959

End: 4154282

Strand: Reverse

Name: 159899806

Synonym: Haur_3288

Alternate gene names: NA

Gene position: 4154282-4153959 (Counterclockwise)

Preceding gene: 159899811

Following gene: 159899805

Centisome position: 65.46

GC content: 49.38

Gene sequence:

>324_bases
ATGACGTGGCTCAGCACAATTGTGTTGCTGCTAATTCCGTTGGTGCTTGCGCCATGCCAGCCACGAATTCTGATCAGCTA
TCATTATCCATGTGCGGCTCAAGTAGACCAAGGTTTTAACGATGAGCATCATGCCGAACAGCCAATTTCTACTCCGGCAG
AGTCGCCAAGTGATGCTTGTGTTAGCCATGCCGCTCCATTTCTATCAGTTTCTGCGCAATTCGAATTAATTCTGGTGGCT
GATCAACTGCATTGGATGCCTGATCCGCTGAATTATCGCTCGCCCAGTTTAGCCCTCCTCGTCCCCCCGCCTAAAAGCAT
TTAA

Upstream 100 bases:

>100_bases
ACGCCAAATTTGGCCTTTTGAGCCGATTTTGGTATAGTGTAGTTAACGAAAAGGACGTTAGGTTATTTGTATGGCGCATG
AATTCCACATTTTACGCACT

Downstream 100 bases:

>100_bases
TCCTTCATTAAGTTTATTGTCCAATCTGCCTGATCATGGTTGATGATCAAGGCTGATTTGGTCGTGATCTGGTATTCACA
TCATTAAATAAAGAAGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTWLSTIVLLLIPLVLAPCQPRILISYHYPCAAQVDQGFNDEHHAEQPISTPAESPSDACVSHAAPFLSVSAQFELILVA
DQLHWMPDPLNYRSPSLALLVPPPKSI

Sequences:

>Translated_107_residues
MTWLSTIVLLLIPLVLAPCQPRILISYHYPCAAQVDQGFNDEHHAEQPISTPAESPSDACVSHAAPFLSVSAQFELILVA
DQLHWMPDPLNYRSPSLALLVPPPKSI
>Mature_106_residues
TWLSTIVLLLIPLVLAPCQPRILISYHYPCAAQVDQGFNDEHHAEQPISTPAESPSDACVSHAAPFLSVSAQFELILVAD
QLHWMPDPLNYRSPSLALLVPPPKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11752; Mature: 11620

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWLSTIVLLLIPLVLAPCQPRILISYHYPCAAQVDQGFNDEHHAEQPISTPAESPSDAC
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
VSHAAPFLSVSAQFELILVADQLHWMPDPLNYRSPSLALLVPPPKSI
HHHCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
TWLSTIVLLLIPLVLAPCQPRILISYHYPCAAQVDQGFNDEHHAEQPISTPAESPSDAC
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
VSHAAPFLSVSAQFELILVADQLHWMPDPLNYRSPSLALLVPPPKSI
HHHCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA