| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is aat
Identifier: 159899720
GI number: 159899720
Start: 4050058
End: 4050633
Strand: Reverse
Name: aat
Synonym: Haur_3202
Alternate gene names: 159899720
Gene position: 4050633-4050058 (Counterclockwise)
Preceding gene: 159899727
Following gene: 159899715
Centisome position: 63.82
GC content: 47.92
Gene sequence:
>576_bases ATGACCAAGCGACTCTCACCACAATTATTAATTTATGGTTACGCCCAAGGAATCTTTCCGATGGATGAGGATGGCCAGAT CTATTGGTATGATCCTGATCCACGGGCGATTATTCCGCTTGATGAACGTTTTCATGTCTCCAGTTCCTTGCAGCGCACAA TTCGTCGCCAAACCTTTGAAATTCGTTTTGATACTGCCTTTCGGGAAACGATGCAGGCCTGTTCTGAACGCGATGAAACC TGGATTAGCCAAGAATTTATTGAGATCTATAGTCAATTACATGCTGGTGGTTTAGCCCATAGTGTCGAGGCTTGGCAGGA TGGCGAAATGGTCGGTGGCTTGTATGGGGTGGGTTTGGCGGGCTTGTTTGCTGGCGAAAGTATGTGGAGCAAAGCGCGTG ATGCCAGTAAAGTGGCTTTGGTGGCGTTGGTCGAACGCTTGCGGGCTGGTGGTTTTCAACTACTCGACACCCAATTTATC ACGCCGCATCTAGCAACATTTGGAGCCTATGAAATTCCACGCGCTGAATATAAACAATTGCTGGTCAAGGCTTTGCAATG CAGCGCAACCTTTTGA
Upstream 100 bases:
>100_bases AATCGAGCTCGACATCAGTTGTTGTTTGTGGTTCGGCGGTTGCGACATCCCGTCGTGTATTCATTGGTTGGTTGACCTCA CTTTTTGGAGACATGATAGC
Downstream 100 bases:
>100_bases TCTGATTGCGCTGCCTGCTGAACGTTAATTGCGAAACCAATCGGCCATGGCTTTAATTCCCTGTTCGATTGGGGTTGCTT CAAGCTCAAAGGTTTTGCTA
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTKRLSPQLLIYGYAQGIFPMDEDGQIYWYDPDPRAIIPLDERFHVSSSLQRTIRRQTFEIRFDTAFRETMQACSERDET WISQEFIEIYSQLHAGGLAHSVEAWQDGEMVGGLYGVGLAGLFAGESMWSKARDASKVALVALVERLRAGGFQLLDTQFI TPHLATFGAYEIPRAEYKQLLVKALQCSATF
Sequences:
>Translated_191_residues MTKRLSPQLLIYGYAQGIFPMDEDGQIYWYDPDPRAIIPLDERFHVSSSLQRTIRRQTFEIRFDTAFRETMQACSERDET WISQEFIEIYSQLHAGGLAHSVEAWQDGEMVGGLYGVGLAGLFAGESMWSKARDASKVALVALVERLRAGGFQLLDTQFI TPHLATFGAYEIPRAEYKQLLVKALQCSATF >Mature_190_residues TKRLSPQLLIYGYAQGIFPMDEDGQIYWYDPDPRAIIPLDERFHVSSSLQRTIRRQTFEIRFDTAFRETMQACSERDETW ISQEFIEIYSQLHAGGLAHSVEAWQDGEMVGGLYGVGLAGLFAGESMWSKARDASKVALVALVERLRAGGFQLLDTQFIT PHLATFGAYEIPRAEYKQLLVKALQCSATF
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=180, Percent_Identity=42.2222222222222, Blast_Score=148, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_HERA2 (A9B6X1)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001545967.1 - ProteinModelPortal: A9B6X1 - SMR: A9B6X1 - GeneID: 5735070 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_3202 - HOGENOM: HBG485363 - OMA: IGESMFY - ProtClustDB: PRK00301 - BioCyc: HAUR316274:HAUR_3202-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 21637; Mature: 21506
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLSPQLLIYGYAQGIFPMDEDGQIYWYDPDPRAIIPLDERFHVSSSLQRTIRRQTFE CCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHE IRFDTAFRETMQACSERDETWISQEFIEIYSQLHAGGLAHSVEAWQDGEMVGGLYGVGLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH GLFAGESMWSKARDASKVALVALVERLRAGGFQLLDTQFITPHLATFGAYEIPRAEYKQL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHCCCCCCCHHHHHHH LVKALQCSATF HHHHHHHCCCC >Mature Secondary Structure TKRLSPQLLIYGYAQGIFPMDEDGQIYWYDPDPRAIIPLDERFHVSSSLQRTIRRQTFE CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHE IRFDTAFRETMQACSERDETWISQEFIEIYSQLHAGGLAHSVEAWQDGEMVGGLYGVGLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH GLFAGESMWSKARDASKVALVALVERLRAGGFQLLDTQFITPHLATFGAYEIPRAEYKQL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHCCCCCCCHHHHHHH LVKALQCSATF HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA