| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899727
Identifier: 159899727
GI number: 159899727
Start: 4058591
End: 4058986
Strand: Reverse
Name: 159899727
Synonym: Haur_3209
Alternate gene names: NA
Gene position: 4058986-4058591 (Counterclockwise)
Preceding gene: 159899728
Following gene: 159899720
Centisome position: 63.96
GC content: 53.54
Gene sequence:
>396_bases ATGCTTAGAACAATTCGTAGTTTACGTTGGTTTGGTTGGTATGCGGTGAGCACTGGGCTTTTGGCAGCACTCGCGCCAAA TCTGCTCTTGAGTGTATTTGGCATGCCGACAACGACTGAGGTTTGGCCGCGCGTTGCGGGCATGTTGGTGGGCTTTATTG GGGTATTACACATGAATGTTAGCCCAATCGATCTGCGCCGCTATGCCATGACCACTGTGATTTTGCGGCTGAGCGTGCCA CTGATTTTCGGTTGGTGGGTAATCACTGGCGCGGGGCCATGGCAATTGCTTTTTTTTGCTGGCGCTGATGTGGTTGGCGC ACTTGCAACGCTTTGGGGCTTGCGGGTCGATCAACAAATGGGCAATCCACGCCAAACCAGCGCGATTGCCCACTAG
Upstream 100 bases:
>100_bases CAAGCCTTGCATGAATTTGCCGCTCGTTCCGCTGATGATCTGCGTGAATGCCCTGTTATTTACGCTTTGGCCGAAATGGC CTGCGCACAAGGAGTTTCTG
Downstream 100 bases:
>100_bases CAATATCAATCGCGAACGTGGCCAGCGCCACGGACTACCCATTTGTATGAGGTCAATTCGCGCAAAGCCATCGGACCACG CGCATGCAATTTTTGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLRTIRSLRWFGWYAVSTGLLAALAPNLLLSVFGMPTTTEVWPRVAGMLVGFIGVLHMNVSPIDLRRYAMTTVILRLSVP LIFGWWVITGAGPWQLLFFAGADVVGALATLWGLRVDQQMGNPRQTSAIAH
Sequences:
>Translated_131_residues MLRTIRSLRWFGWYAVSTGLLAALAPNLLLSVFGMPTTTEVWPRVAGMLVGFIGVLHMNVSPIDLRRYAMTTVILRLSVP LIFGWWVITGAGPWQLLFFAGADVVGALATLWGLRVDQQMGNPRQTSAIAH >Mature_131_residues MLRTIRSLRWFGWYAVSTGLLAALAPNLLLSVFGMPTTTEVWPRVAGMLVGFIGVLHMNVSPIDLRRYAMTTVILRLSVP LIFGWWVITGAGPWQLLFFAGADVVGALATLWGLRVDQQMGNPRQTSAIAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14437; Mature: 14437
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTIRSLRWFGWYAVSTGLLAALAPNLLLSVFGMPTTTEVWPRVAGMLVGFIGVLHMNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC SPIDLRRYAMTTVILRLSVPLIFGWWVITGAGPWQLLFFAGADVVGALATLWGLRVDQQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHC GNPRQTSAIAH CCCCCHHCCCC >Mature Secondary Structure MLRTIRSLRWFGWYAVSTGLLAALAPNLLLSVFGMPTTTEVWPRVAGMLVGFIGVLHMNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC SPIDLRRYAMTTVILRLSVPLIFGWWVITGAGPWQLLFFAGADVVGALATLWGLRVDQQM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHC GNPRQTSAIAH CCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA