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The map label for this gene is yjbG [H]

Identifier: 159899634

GI number: 159899634

Start: 3929497

End: 3931308

Strand: Reverse

Name: yjbG [H]

Synonym: Haur_3115

Alternate gene names: 159899634

Gene position: 3931308-3929497 (Counterclockwise)

Preceding gene: 159899639

Following gene: 159899633

Centisome position: 61.94

GC content: 50.0

Gene sequence:

>1812_bases
ATGACCATGGTTGAAGAACAGGTACCAACCCGCGAGGAAGTAAGCGCCGAAGACACTTGGGATATTAGTAGTCTCTATGC
AGACCAAGCGGCTTGGGAGGCTGATGTTGAACGAATTAGCAGCGATTTGCTGCCAGCCTTGACCAATTTGCAAGGCACGC
TCGCCAATGGTCCTGAGGCGTTGTTGGCAGTGTTTCAAGCCCAAGAAGCCCTTGGCATGGTGCTCGAACAAATTTATGTC
TATGCCAGTTTACGAGCCGATGAAGATACGGCCAACCAACATTACCAAGCCCTCGAAGAACGGGCCACCGCCCTCTCGAT
TAAGGCAAGCGCCGCTACCTCTTGGATTGAGCCAGAGCTTTTAGCCCTTTCCGATGAGCAAATTTTGGGCTATGTGAGCA
GTTTGCCCGCCCTCGAACTTTATCGCCGCGCCTTAGAAGAGCAAATTCGTTTGCGCCAACACACCCGCTCTGGCGAAGTT
GAAGAATTATTGGCCCAAACTGGCGAGATTAGCCGTGGCGCTCAAACCACCTTCAACATGTTTAGCGATGCTGACCTCAA
ATTCCCGCCGATTGAAGATGAACAGGGCAAGCCGCTCGAAGTGACGATGGGCCGCTACGCAGTGTTGCTGGAAAACCCCA
ACCAACGCATTCGCCGCGATACTTTTATGAGCATTCACCGCACCTATCGCCAATTTCGTAATATGTTGGCGGCCAATTAT
GCGACCAATGTGCGCAGTAATATTTTTTATGCCAAAGCGCGGGGCTACGATTCAGCCTTAGATGCCAGCCTAAAACCCAA
AGAAATTCCTATGAGCGTCTACGATAATTTGATCAGCACGGTGCACGAGCACTTGCCCAAATTGCATCGTTATGGCGCAG
TGCGCAAGCGCATTTTGGGGGTTGATAGCCTGCATGCCTACGATTGGTTTGTGCCATTAAACGGCGCAGCCCCAACCAAA
ATCGACTTTGAACAAGGTGCTTCGTTGATTTTGAGCGCCTTGGAGCCACTTGGCGCTGAATATAGCTCCAACCTCGGTCA
TGGGCTGGAATCGCGCTGGGTTGACCGCTACGAAAATAAAAATAAACGCTCAGGAGCCTATTCATGGGGTTGTTACACCT
CACAGCCCTTTATTTTGATGAACTACAAAAATAACTTGAATAGTCTCTTTACCCTGGCCCATGAGCTTGGTCACTCGATG
CACTCGTTGATGACCCGTAAATATCAACCCTATACCTATGGCCATTACACCTTGTTTGTGGCCGAAGTCGCTTCAACTTT
AAACGAAGCTTTGCTGGCCGAATATATGCTCAAAACCAGCGATGACCCAGCCTTGCGCTTGCAATTGGTCACCCAGCAAA
TTGATGATATTCGCGGCACGTTGTTGCGTCAAACCTTGTTTGCCGAGTTCGAGCGCGAAACCCATCGCATGGTCGAGCAA
GGTGAAGCGCTAACTGCCGATAACCTCAGTGCCTTGTATCGCCGCTTGATCGAGCAATACTATGGCCCCGAATTGGTCAT
CGATGAAGAATTGGATATTGAATGGGCACGGATTCCTCACTTCTACCGCTCGTTCTATGTCTATCAATATTCCACTGGCA
TTTCAGCTGCCTTGGCCTTGGCCGATAAGATTTTGACCGAAGGCGCTGGTGCTGCTGAAAACTACGTCAACTTCTTGCGA
GGTGGTAATTCCAAATCATCAATCGATCTACTCAAGGGTGCTGGGGTCGATATGACCACCCCCGACCCAATTCATCGAGC
CATGAATCGCTTTGGCGATTTGGTGACCAAACTCGATGAATTAACCGCCTAA

Upstream 100 bases:

>100_bases
GCTAAAATCAGCATACTATATCCATTGATAATTACGCCTGCTGGAGCAGTGTTGCAATGGTGCAGTACTGAAGCATTGAC
ATGAAACTGGAGAACCCCTC

Downstream 100 bases:

>100_bases
TCGCCTTTCATGCTCGCCCTTCGTTGTGAAGGGCGAGTGCTTGTGTTGTGTAAGGAGTTGGCATGGCCGATCCACGGGTT
CTCAAAATGGCTCATACGTT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MTMVEEQVPTREEVSAEDTWDISSLYADQAAWEADVERISSDLLPALTNLQGTLANGPEALLAVFQAQEALGMVLEQIYV
YASLRADEDTANQHYQALEERATALSIKASAATSWIEPELLALSDEQILGYVSSLPALELYRRALEEQIRLRQHTRSGEV
EELLAQTGEISRGAQTTFNMFSDADLKFPPIEDEQGKPLEVTMGRYAVLLENPNQRIRRDTFMSIHRTYRQFRNMLAANY
ATNVRSNIFYAKARGYDSALDASLKPKEIPMSVYDNLISTVHEHLPKLHRYGAVRKRILGVDSLHAYDWFVPLNGAAPTK
IDFEQGASLILSALEPLGAEYSSNLGHGLESRWVDRYENKNKRSGAYSWGCYTSQPFILMNYKNNLNSLFTLAHELGHSM
HSLMTRKYQPYTYGHYTLFVAEVASTLNEALLAEYMLKTSDDPALRLQLVTQQIDDIRGTLLRQTLFAEFERETHRMVEQ
GEALTADNLSALYRRLIEQYYGPELVIDEELDIEWARIPHFYRSFYVYQYSTGISAALALADKILTEGAGAAENYVNFLR
GGNSKSSIDLLKGAGVDMTTPDPIHRAMNRFGDLVTKLDELTA

Sequences:

>Translated_603_residues
MTMVEEQVPTREEVSAEDTWDISSLYADQAAWEADVERISSDLLPALTNLQGTLANGPEALLAVFQAQEALGMVLEQIYV
YASLRADEDTANQHYQALEERATALSIKASAATSWIEPELLALSDEQILGYVSSLPALELYRRALEEQIRLRQHTRSGEV
EELLAQTGEISRGAQTTFNMFSDADLKFPPIEDEQGKPLEVTMGRYAVLLENPNQRIRRDTFMSIHRTYRQFRNMLAANY
ATNVRSNIFYAKARGYDSALDASLKPKEIPMSVYDNLISTVHEHLPKLHRYGAVRKRILGVDSLHAYDWFVPLNGAAPTK
IDFEQGASLILSALEPLGAEYSSNLGHGLESRWVDRYENKNKRSGAYSWGCYTSQPFILMNYKNNLNSLFTLAHELGHSM
HSLMTRKYQPYTYGHYTLFVAEVASTLNEALLAEYMLKTSDDPALRLQLVTQQIDDIRGTLLRQTLFAEFERETHRMVEQ
GEALTADNLSALYRRLIEQYYGPELVIDEELDIEWARIPHFYRSFYVYQYSTGISAALALADKILTEGAGAAENYVNFLR
GGNSKSSIDLLKGAGVDMTTPDPIHRAMNRFGDLVTKLDELTA
>Mature_602_residues
TMVEEQVPTREEVSAEDTWDISSLYADQAAWEADVERISSDLLPALTNLQGTLANGPEALLAVFQAQEALGMVLEQIYVY
ASLRADEDTANQHYQALEERATALSIKASAATSWIEPELLALSDEQILGYVSSLPALELYRRALEEQIRLRQHTRSGEVE
ELLAQTGEISRGAQTTFNMFSDADLKFPPIEDEQGKPLEVTMGRYAVLLENPNQRIRRDTFMSIHRTYRQFRNMLAANYA
TNVRSNIFYAKARGYDSALDASLKPKEIPMSVYDNLISTVHEHLPKLHRYGAVRKRILGVDSLHAYDWFVPLNGAAPTKI
DFEQGASLILSALEPLGAEYSSNLGHGLESRWVDRYENKNKRSGAYSWGCYTSQPFILMNYKNNLNSLFTLAHELGHSMH
SLMTRKYQPYTYGHYTLFVAEVASTLNEALLAEYMLKTSDDPALRLQLVTQQIDDIRGTLLRQTLFAEFERETHRMVEQG
EALTADNLSALYRRLIEQYYGPELVIDEELDIEWARIPHFYRSFYVYQYSTGISAALALADKILTEGAGAAENYVNFLRG
GNSKSSIDLLKGAGVDMTTPDPIHRAMNRFGDLVTKLDELTA

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68084; Mature: 67953

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVEEQVPTREEVSAEDTWDISSLYADQAAWEADVERISSDLLPALTNLQGTLANGPEA
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LLAVFQAQEALGMVLEQIYVYASLRADEDTANQHYQALEERATALSIKASAATSWIEPEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHCCCHH
LALSDEQILGYVSSLPALELYRRALEEQIRLRQHTRSGEVEELLAQTGEISRGAQTTFNM
HEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH
FSDADLKFPPIEDEQGKPLEVTMGRYAVLLENPNQRIRRDTFMSIHRTYRQFRNMLAANY
HCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNVRSNIFYAKARGYDSALDASLKPKEIPMSVYDNLISTVHEHLPKLHRYGAVRKRILG
HHHHHHCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VDSLHAYDWFVPLNGAAPTKIDFEQGASLILSALEPLGAEYSSNLGHGLESRWVDRYENK
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCC
NKRSGAYSWGCYTSQPFILMNYKNNLNSLFTLAHELGHSMHSLMTRKYQPYTYGHYTLFV
CCCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AEVASTLNEALLAEYMLKTSDDPALRLQLVTQQIDDIRGTLLRQTLFAEFERETHRMVEQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEALTADNLSALYRRLIEQYYGPELVIDEELDIEWARIPHFYRSFYVYQYSTGISAALAL
CCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHH
ADKILTEGAGAAENYVNFLRGGNSKSSIDLLKGAGVDMTTPDPIHRAMNRFGDLVTKLDE
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LTA
HCC
>Mature Secondary Structure 
TMVEEQVPTREEVSAEDTWDISSLYADQAAWEADVERISSDLLPALTNLQGTLANGPEA
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LLAVFQAQEALGMVLEQIYVYASLRADEDTANQHYQALEERATALSIKASAATSWIEPEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHCCCHH
LALSDEQILGYVSSLPALELYRRALEEQIRLRQHTRSGEVEELLAQTGEISRGAQTTFNM
HEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH
FSDADLKFPPIEDEQGKPLEVTMGRYAVLLENPNQRIRRDTFMSIHRTYRQFRNMLAANY
HCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNVRSNIFYAKARGYDSALDASLKPKEIPMSVYDNLISTVHEHLPKLHRYGAVRKRILG
HHHHHHCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VDSLHAYDWFVPLNGAAPTKIDFEQGASLILSALEPLGAEYSSNLGHGLESRWVDRYENK
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCC
NKRSGAYSWGCYTSQPFILMNYKNNLNSLFTLAHELGHSMHSLMTRKYQPYTYGHYTLFV
CCCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AEVASTLNEALLAEYMLKTSDDPALRLQLVTQQIDDIRGTLLRQTLFAEFERETHRMVEQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEALTADNLSALYRRLIEQYYGPELVIDEELDIEWARIPHFYRSFYVYQYSTGISAALAL
CCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHH
ADKILTEGAGAAENYVNFLRGGNSKSSIDLLKGAGVDMTTPDPIHRAMNRFGDLVTKLDE
HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LTA
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]