| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899633
Identifier: 159899633
GI number: 159899633
Start: 3928331
End: 3929434
Strand: Reverse
Name: 159899633
Synonym: Haur_3114
Alternate gene names: NA
Gene position: 3929434-3928331 (Counterclockwise)
Preceding gene: 159899634
Following gene: 159899632
Centisome position: 61.91
GC content: 48.64
Gene sequence:
>1104_bases ATGGCCGATCCACGGGTTCTCAAAATGGCTCATACGTTGGTCAATTATTCGATGAAAATCAAAGAGGGCGAATTGGTGGT TTTGCAGAGTGAGCCTGCTGCTGCGCCCTTAGTTCAAGCAATGTATCGCGAAATTTTGCTGGCTGGCGGGCATCCAGTTG CCCATACGGTTATGCCTGGGCTTTCGCGAATTTTGCTCAATCATGGCAACGATAAGCAATTGCAGTGGATCTCGCCCTAC GATCGTTTGGGGATTGAAACTGCTGATGTGCGGATTCGGATCGATGCTCAAAGCAACACCCGCGAACTCTCGCAGGTTGA CCCTGAGCGCCAATCGGTGTTTCAAAAATCACGCCGCGAATTGATGGGCACGTTGATGTCACGCACCCATGCTGGCGATT TTCGCTGGTGTGTCACGCTCTTTCCAACCGAGGGCTTGGCTCAAGATGCCAATATGAGCTTGCCTGATTTTGAGGATTTT GTGTATGGCGTGTGCTTTTTGAACGAAGCCGACCCAATCGCCAAATGGCAAGAACTTCACGATATGCAAGCACATTTGAT CAATTACTTGCAAAATAAGCGCGAAGTGCATATCCTAGGTGAAGGCACCGATATTCGGGTTGGGATTGCTGGGCGCAGCT TTGTCAACTGTGCAGGCGATGCCAACTTCCCTGATGGCGAGTTCTTTACTGGCCCCGAAGAAACTAACGTCAATGGTGTT GTACGCTTTTCGTTCCCAGCGATCTATAATGGACGCGAAGTCGAAGACGTGCAATTAACCTTCGAAGCTGGTAAAGTTGT CAAGGCAACCGCTAAGAGTGGCCAAGATTTCCTTGAGCAAATGTTGAATGTTGATGCTGGCGCACGGATTTTGGGCGAAT TTGCCTTTGGCACCAACCCCAACATCAAAAATTACACCCGTAACATCTTATTCGATGAGAAAATGGGTGGTACAATCCAT ATGGCAGTCGGCGCTTCCTACCCTGAAACTGGCGGTTTGAATCAATCGGCAATCCACTGGGACATGGTTTGCGATTTACG TCAAAACAGCGAAGTGTATGTCGATGGTCAATTGTTCCAAAAAAATGGCACATTCGTGGTCTAA
Upstream 100 bases:
>100_bases GCGATTTGGTGACCAAACTCGATGAATTAACCGCCTAATCGCCTTTCATGCTCGCCCTTCGTTGTGAAGGGCGAGTGCTT GTGTTGTGTAAGGAGTTGGC
Downstream 100 bases:
>100_bases ACTTTCCCTTTTTCCTCCCAACTAAAGCATGTTCGAGGGTATGAACAGCACTGTTCATACCCTTTAGGCTATCGTTCAGG CAGTGACGCAAGTTTTGGGT
Product: peptidase M29 aminopeptidase II
Products: NA
Alternate protein names: Aminopeptidase II; AP-II [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MADPRVLKMAHTLVNYSMKIKEGELVVLQSEPAAAPLVQAMYREILLAGGHPVAHTVMPGLSRILLNHGNDKQLQWISPY DRLGIETADVRIRIDAQSNTRELSQVDPERQSVFQKSRRELMGTLMSRTHAGDFRWCVTLFPTEGLAQDANMSLPDFEDF VYGVCFLNEADPIAKWQELHDMQAHLINYLQNKREVHILGEGTDIRVGIAGRSFVNCAGDANFPDGEFFTGPEETNVNGV VRFSFPAIYNGREVEDVQLTFEAGKVVKATAKSGQDFLEQMLNVDAGARILGEFAFGTNPNIKNYTRNILFDEKMGGTIH MAVGASYPETGGLNQSAIHWDMVCDLRQNSEVYVDGQLFQKNGTFVV
Sequences:
>Translated_367_residues MADPRVLKMAHTLVNYSMKIKEGELVVLQSEPAAAPLVQAMYREILLAGGHPVAHTVMPGLSRILLNHGNDKQLQWISPY DRLGIETADVRIRIDAQSNTRELSQVDPERQSVFQKSRRELMGTLMSRTHAGDFRWCVTLFPTEGLAQDANMSLPDFEDF VYGVCFLNEADPIAKWQELHDMQAHLINYLQNKREVHILGEGTDIRVGIAGRSFVNCAGDANFPDGEFFTGPEETNVNGV VRFSFPAIYNGREVEDVQLTFEAGKVVKATAKSGQDFLEQMLNVDAGARILGEFAFGTNPNIKNYTRNILFDEKMGGTIH MAVGASYPETGGLNQSAIHWDMVCDLRQNSEVYVDGQLFQKNGTFVV >Mature_366_residues ADPRVLKMAHTLVNYSMKIKEGELVVLQSEPAAAPLVQAMYREILLAGGHPVAHTVMPGLSRILLNHGNDKQLQWISPYD RLGIETADVRIRIDAQSNTRELSQVDPERQSVFQKSRRELMGTLMSRTHAGDFRWCVTLFPTEGLAQDANMSLPDFEDFV YGVCFLNEADPIAKWQELHDMQAHLINYLQNKREVHILGEGTDIRVGIAGRSFVNCAGDANFPDGEFFTGPEETNVNGVV RFSFPAIYNGREVEDVQLTFEAGKVVKATAKSGQDFLEQMLNVDAGARILGEFAFGTNPNIKNYTRNILFDEKMGGTIHM AVGASYPETGGLNQSAIHWDMVCDLRQNSEVYVDGQLFQKNGTFVV
Specific function: Broad specificity metal-dependent exopeptidase, releasing all N-terminal amino acids [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 40917; Mature: 40786
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPRVLKMAHTLVNYSMKIKEGELVVLQSEPAAAPLVQAMYREILLAGGHPVAHTVMPG CCCCHHHHHHHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH LSRILLNHGNDKQLQWISPYDRLGIETADVRIRIDAQSNTRELSQVDPERQSVFQKSRRE HHHHHHCCCCCCCEEEECCHHHCCCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHH LMGTLMSRTHAGDFRWCVTLFPTEGLAQDANMSLPDFEDFVYGVCFLNEADPIAKWQELH HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHH DMQAHLINYLQNKREVHILGEGTDIRVGIAGRSFVNCAGDANFPDGEFFTGPEETNVNGV HHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEECCCCCCCCCEE VRFSFPAIYNGREVEDVQLTFEAGKVVKATAKSGQDFLEQMLNVDAGARILGEFAFGTNP EEEECCEEECCCEEEEEEEEEECCCEEEEHHHCCHHHHHHHHCCCCCHHHHHHHCCCCCC NIKNYTRNILFDEKMGGTIHMAVGASYPETGGLNQSAIHWDMVCDLRQNSEVYVDGQLFQ CHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECEEEE KNGTFVV CCCCEEC >Mature Secondary Structure ADPRVLKMAHTLVNYSMKIKEGELVVLQSEPAAAPLVQAMYREILLAGGHPVAHTVMPG CCCHHHHHHHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH LSRILLNHGNDKQLQWISPYDRLGIETADVRIRIDAQSNTRELSQVDPERQSVFQKSRRE HHHHHHCCCCCCCEEEECCHHHCCCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHH LMGTLMSRTHAGDFRWCVTLFPTEGLAQDANMSLPDFEDFVYGVCFLNEADPIAKWQELH HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHH DMQAHLINYLQNKREVHILGEGTDIRVGIAGRSFVNCAGDANFPDGEFFTGPEETNVNGV HHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEECCCCCCCCCEE VRFSFPAIYNGREVEDVQLTFEAGKVVKATAKSGQDFLEQMLNVDAGARILGEFAFGTNP EEEECCEEECCCEEEEEEEEEECCCEEEEHHHCCHHHHHHHHCCCCCHHHHHHHCCCCCC NIKNYTRNILFDEKMGGTIHMAVGASYPETGGLNQSAIHWDMVCDLRQNSEVYVDGQLFQ CHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECEEEE KNGTFVV CCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117; 938681 [H]