| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899632
Identifier: 159899632
GI number: 159899632
Start: 3927387
End: 3928151
Strand: Reverse
Name: 159899632
Synonym: Haur_3113
Alternate gene names: NA
Gene position: 3928151-3927387 (Counterclockwise)
Preceding gene: 159899633
Following gene: 159899631
Centisome position: 61.89
GC content: 51.76
Gene sequence:
>765_bases ATGGTCGTATCTCGCTCACGGGCAGTGCTCAAAAACGTTGCATGGCTGACATGCGGCGCGTTGATCGCCCTGCTGATCGT CTATCTGCGGCGTGATCCGCAGGCCACCGCCGCCCCGAACATCACCACTGGTAAGGTCGAAATTGCCAACCAGAGCAATC GGGCTGGCTATGATCCACTGTCGTTAGCCGAAATCGAACAAGCCCAAAAGCTAGCCCAAGCTGAATGGCAAGCCAAACGC GGCAAAGTTGTTGAAAACAAGGCCGTACCTGCTGATGCCCAATTGGAGTTCGTCAAAACCGAGCGCCACGAAGAAATCCA AGCGGTGTATGATAAAGGTTCATGGCAACGTCGTGCCGATGTACTGATTTTCGATTATGCCAAAAATAGCTTGGTCGCTG TGTTAGTCAATCTCAGCACAGGCAAAGTTGATGCCTTGGAGCAAGCCCGTGGCAGCCAACCCCACCCAACCGATCGTGAA ACTGCTCGCGCTTTACAATTAGTGCTTGATCATCCAGCATTTGGCCCACAACTGCGCGGTGAATACCAAGCCTTGACGAA AAAGAGCTTGACCAAAGCCAGCCAACTTCATGCTGCTGGTTTTGTCTATATCGCCGAACCCCAAATTGATAACGCCGCAG TGCTGCGAAGTTGCCAACAAAATCGTTGTGTGCAATTGTTGCTCAGCGCCGATAATGAATGGGCGGTCAATAGCACCCCG ATTGTCGATCTCTCGAATGGCCTTGTGGTCAGTTTAAATCGTTAG
Upstream 100 bases:
>100_bases GCAGTGACGCAAGTTTTGGGTTATGTTGGTTTCTGGCCCAACACCCATCGCAAATGCGGCTGCTTGATTATTGAACCATT TCTGCTGTAAGGAGAGTCCG
Downstream 100 bases:
>100_bases GAGTTTGGTGATGAAGCTTTCAGCACGTTGGGGCATGCTGCTCGGGATGCTATTAATTGCGGTCAGTTTGTTTAGCACCC AGACTCAGCAAGAAGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MVVSRSRAVLKNVAWLTCGALIALLIVYLRRDPQATAAPNITTGKVEIANQSNRAGYDPLSLAEIEQAQKLAQAEWQAKR GKVVENKAVPADAQLEFVKTERHEEIQAVYDKGSWQRRADVLIFDYAKNSLVAVLVNLSTGKVDALEQARGSQPHPTDRE TARALQLVLDHPAFGPQLRGEYQALTKKSLTKASQLHAAGFVYIAEPQIDNAAVLRSCQQNRCVQLLLSADNEWAVNSTP IVDLSNGLVVSLNR
Sequences:
>Translated_254_residues MVVSRSRAVLKNVAWLTCGALIALLIVYLRRDPQATAAPNITTGKVEIANQSNRAGYDPLSLAEIEQAQKLAQAEWQAKR GKVVENKAVPADAQLEFVKTERHEEIQAVYDKGSWQRRADVLIFDYAKNSLVAVLVNLSTGKVDALEQARGSQPHPTDRE TARALQLVLDHPAFGPQLRGEYQALTKKSLTKASQLHAAGFVYIAEPQIDNAAVLRSCQQNRCVQLLLSADNEWAVNSTP IVDLSNGLVVSLNR >Mature_254_residues MVVSRSRAVLKNVAWLTCGALIALLIVYLRRDPQATAAPNITTGKVEIANQSNRAGYDPLSLAEIEQAQKLAQAEWQAKR GKVVENKAVPADAQLEFVKTERHEEIQAVYDKGSWQRRADVLIFDYAKNSLVAVLVNLSTGKVDALEQARGSQPHPTDRE TARALQLVLDHPAFGPQLRGEYQALTKKSLTKASQLHAAGFVYIAEPQIDNAAVLRSCQQNRCVQLLLSADNEWAVNSTP IVDLSNGLVVSLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27889; Mature: 27889
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSRSRAVLKNVAWLTCGALIALLIVYLRRDPQATAAPNITTGKVEIANQSNRAGYDPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCC SLAEIEQAQKLAQAEWQAKRGKVVENKAVPADAQLEFVKTERHEEIQAVYDKGSWQRRAD HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VLIFDYAKNSLVAVLVNLSTGKVDALEQARGSQPHPTDRETARALQLVLDHPAFGPQLRG EEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC EYQALTKKSLTKASQLHAAGFVYIAEPQIDNAAVLRSCQQNRCVQLLLSADNEWAVNSTP HHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCC IVDLSNGLVVSLNR EEEECCCEEEEECC >Mature Secondary Structure MVVSRSRAVLKNVAWLTCGALIALLIVYLRRDPQATAAPNITTGKVEIANQSNRAGYDPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCC SLAEIEQAQKLAQAEWQAKRGKVVENKAVPADAQLEFVKTERHEEIQAVYDKGSWQRRAD HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VLIFDYAKNSLVAVLVNLSTGKVDALEQARGSQPHPTDRETARALQLVLDHPAFGPQLRG EEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC EYQALTKKSLTKASQLHAAGFVYIAEPQIDNAAVLRSCQQNRCVQLLLSADNEWAVNSTP HHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCC IVDLSNGLVVSLNR EEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA