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The map label for this gene is ybhR [H]

Identifier: 159899531

GI number: 159899531

Start: 3804349

End: 3805086

Strand: Reverse

Name: ybhR [H]

Synonym: Haur_3012

Alternate gene names: 159899531

Gene position: 3805086-3804349 (Counterclockwise)

Preceding gene: 159899532

Following gene: 159899528

Centisome position: 59.95

GC content: 45.39

Gene sequence:

>738_bases
ATGAGCCGAATTTTAGTTGTTGCCAAACGGGTATTAACCCAACTTCGCCATGACAAGCGGTTACTTGGCTTGTCGGTTAT
GGCTCCGTTGTTGATTATTTATCTGTTGAAAATTTTCTTTGATACCATGCCCAAGGGCTTTAATAATGCCCGCTACATTA
TGCCGATCACGGCCTTTATGGTGCATTTTTTGGCATTTTTGCTCTGTGCAATTGTGTTGGTGCAAGAGCGCACCGCCGGA
ACTTTAGAACGTATGTTTATCAACGGCTTTCGGCGCATTGAAATTATTGGTGGCTATGTGCTGGGTTATATTCTGCTCGC
CACTTTCCAGGCGGCAATTGCCTTGGCGCAAGCTTTGTGGTTATTCGATTTGAGTTATGCGTGGGGCGATTTGGCGATGT
TGTTTGGGGTAATTTGGCTGCTGGCGATTACCTCAGTGATGCTCGGGATGTTTATCTCGACGTTTGCGCGGCATGAAGGC
CAAGTTTTCCCCTTTATTCCGATGATTATCTTGCCGTCGGTGTTTCTTTCGGGCTTGTTGATTAATCCTGAACAACTGCC
AACATGGGCCAATTGGCTGGGTCATGCCTTCCCATTGTTTTATGCCAACGATGCAATTCAAGAAATCATTGGTAAAACCC
CTACGAGCAGTGTGATTTGGACGAATATGGCGATTCTGGTTGGCTATGGCTTGTTTTTATTGACCTTGGCTTCGCGTACT
TTAAAAGATGTAGAGTAA

Upstream 100 bases:

>100_bases
ACAGCTATGGCCTGAATCCAACGATCCAAGCTTTGACCTTGCACCCCGATTCGTTGGAAACGATTGTGCTGCGCATGCTA
CAAAAAAGCGAGGTATCGCA

Downstream 100 bases:

>100_bases
GCAAGCATAGAGAGTATAAATTATAGAGGGCAATTGGCTCGAAAGGTTATACTTATAAAGCCAATCGCCAAATCAAATAT
GGTTTATGTTCTATGTGCTA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSRILVVAKRVLTQLRHDKRLLGLSVMAPLLIIYLLKIFFDTMPKGFNNARYIMPITAFMVHFLAFLLCAIVLVQERTAG
TLERMFINGFRRIEIIGGYVLGYILLATFQAAIALAQALWLFDLSYAWGDLAMLFGVIWLLAITSVMLGMFISTFARHEG
QVFPFIPMIILPSVFLSGLLINPEQLPTWANWLGHAFPLFYANDAIQEIIGKTPTSSVIWTNMAILVGYGLFLLTLASRT
LKDVE

Sequences:

>Translated_245_residues
MSRILVVAKRVLTQLRHDKRLLGLSVMAPLLIIYLLKIFFDTMPKGFNNARYIMPITAFMVHFLAFLLCAIVLVQERTAG
TLERMFINGFRRIEIIGGYVLGYILLATFQAAIALAQALWLFDLSYAWGDLAMLFGVIWLLAITSVMLGMFISTFARHEG
QVFPFIPMIILPSVFLSGLLINPEQLPTWANWLGHAFPLFYANDAIQEIIGKTPTSSVIWTNMAILVGYGLFLLTLASRT
LKDVE
>Mature_244_residues
SRILVVAKRVLTQLRHDKRLLGLSVMAPLLIIYLLKIFFDTMPKGFNNARYIMPITAFMVHFLAFLLCAIVLVQERTAGT
LERMFINGFRRIEIIGGYVLGYILLATFQAAIALAQALWLFDLSYAWGDLAMLFGVIWLLAITSVMLGMFISTFARHEGQ
VFPFIPMIILPSVFLSGLLINPEQLPTWANWLGHAFPLFYANDAIQEIIGKTPTSSVIWTNMAILVGYGLFLLTLASRTL
KDVE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=157, Percent_Identity=24.8407643312102, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27594; Mature: 27462

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCC
>Mature Secondary Structure 
SRILVVAKRVLTQLRHDKRLLGLSVMAPLLIIYLLKIFFDTMPKGFNNARYIMPITAFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VHFLAFLLCAIVLVQERTAGTLERMFINGFRRIEIIGGYVLGYILLATFQAAIALAQALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDLSYAWGDLAMLFGVIWLLAITSVMLGMFISTFARHEGQVFPFIPMIILPSVFLSGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
INPEQLPTWANWLGHAFPLFYANDAIQEIIGKTPTSSVIWTNMAILVGYGLFLLTLASRT
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKDVE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]