| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899503
Identifier: 159899503
GI number: 159899503
Start: 3769030
End: 3769926
Strand: Reverse
Name: 159899503
Synonym: Haur_2984
Alternate gene names: NA
Gene position: 3769926-3769030 (Counterclockwise)
Preceding gene: 159899504
Following gene: 159899502
Centisome position: 59.4
GC content: 51.17
Gene sequence:
>897_bases ATGCAACCTAAACTGCATTTGGCGCTCGGAACCCATGTGGTGCTGTTGCGCACGATCGATAATCAGGCCAAACATAGTGT GGCTCAAGTGGTTGCAACGCCCTGCGAACATAGCGAATATTACACGGTGCGCTGTGTTGATGGTACGCTTTTGCAACTCA CCCGCCAAGATTTTGGCCTGCGTAAGCAATTCAACGACCCATTGTTGGGCTTGGAGCAACCGCAACTCGCTGAAAACCGC CAATGGATTCACTATCGTTGTGTGGTTGGCTCACGCGCTTATGGCTTGGATACGCCTGAATCGGATACTGATTGGCGTGG CTTTTTTGTGCCAGCAGCAGCAGTAGATTGGGGCTTGGCGACCGTGCCTGAACAATATGAATTTGTTGAAACCCAAGAAC ACTATTGGGAAGTGCAAAAATTTTTGAATTTGCTGTTGCGAGCCAATCCAAATGCGCTTGAATGTTTGTATACCGACATG GTTGAGCATGCCTCGCCGTTGGCCTTGGAGCTACGCGCAATGCGCCATAAACTGCTGACCAGCCGGATCTATCAAAGCCA TAACAGCTATGTGTTGGCCCAATTTCGCCTGCTTGAGCGCGATTTACGCACTCATGGCAGCTTGCGCTGGAAACATGTGA TGCATTTGATTCGCTTGTTGCTGAGCGGCATCCACGCTTTGCGCCATGGCGAATTACGCTTGCGTCACGTTGCCGAACAC GATCAACTGATGGCGATTCGCGCTGGCGAATTGGAATGGGATACGATTAATCGTTGGCGAATTGCCCTGCATGCTGAATT TGAACAAGCCTATGCCGCAACCAAACTGCCAATTTTGCCCGATCTAGCGGCGGCGAATGCTTGGTTGCTCCAAGTGCGTC GCGCCCAAGTGGACTAA
Upstream 100 bases:
>100_bases GAACGAGTTGCGGCAAGCTACAACTATCGCGTCAGCATCGAGCCGTTGGGGCCCGAAGATCCCAACCATGGTGCGCCGTC GCAATTGGGGGTGTTTGAAG
Downstream 100 bases:
>100_bases GGAGCTGGTTTCATGGAATTAGGAATACCTGAATTGTCGTTGGTGGTATTGGTTGGGGCTTCTGGCTCAGGCAAATCGAC CTTTGCGCAGCGCTATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MQPKLHLALGTHVVLLRTIDNQAKHSVAQVVATPCEHSEYYTVRCVDGTLLQLTRQDFGLRKQFNDPLLGLEQPQLAENR QWIHYRCVVGSRAYGLDTPESDTDWRGFFVPAAAVDWGLATVPEQYEFVETQEHYWEVQKFLNLLLRANPNALECLYTDM VEHASPLALELRAMRHKLLTSRIYQSHNSYVLAQFRLLERDLRTHGSLRWKHVMHLIRLLLSGIHALRHGELRLRHVAEH DQLMAIRAGELEWDTINRWRIALHAEFEQAYAATKLPILPDLAAANAWLLQVRRAQVD
Sequences:
>Translated_298_residues MQPKLHLALGTHVVLLRTIDNQAKHSVAQVVATPCEHSEYYTVRCVDGTLLQLTRQDFGLRKQFNDPLLGLEQPQLAENR QWIHYRCVVGSRAYGLDTPESDTDWRGFFVPAAAVDWGLATVPEQYEFVETQEHYWEVQKFLNLLLRANPNALECLYTDM VEHASPLALELRAMRHKLLTSRIYQSHNSYVLAQFRLLERDLRTHGSLRWKHVMHLIRLLLSGIHALRHGELRLRHVAEH DQLMAIRAGELEWDTINRWRIALHAEFEQAYAATKLPILPDLAAANAWLLQVRRAQVD >Mature_298_residues MQPKLHLALGTHVVLLRTIDNQAKHSVAQVVATPCEHSEYYTVRCVDGTLLQLTRQDFGLRKQFNDPLLGLEQPQLAENR QWIHYRCVVGSRAYGLDTPESDTDWRGFFVPAAAVDWGLATVPEQYEFVETQEHYWEVQKFLNLLLRANPNALECLYTDM VEHASPLALELRAMRHKLLTSRIYQSHNSYVLAQFRLLERDLRTHGSLRWKHVMHLIRLLLSGIHALRHGELRLRHVAEH DQLMAIRAGELEWDTINRWRIALHAEFEQAYAATKLPILPDLAAANAWLLQVRRAQVD
Specific function: Unknown
COG id: COG3541
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34525; Mature: 34525
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKLHLALGTHVVLLRTIDNQAKHSVAQVVATPCEHSEYYTVRCVDGTLLQLTRQDFGL CCCCEEEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCH RKQFNDPLLGLEQPQLAENRQWIHYRCVVGSRAYGLDTPESDTDWRGFFVPAAAVDWGLA HHHCCCCCCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC TVPEQYEFVETQEHYWEVQKFLNLLLRANPNALECLYTDMVEHASPLALELRAMRHKLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SRIYQSHNSYVLAQFRLLERDLRTHGSLRWKHVMHLIRLLLSGIHALRHGELRLRHVAEH HHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC DQLMAIRAGELEWDTINRWRIALHAEFEQAYAATKLPILPDLAAANAWLLQVRRAQVD CCEEEEECCCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPKLHLALGTHVVLLRTIDNQAKHSVAQVVATPCEHSEYYTVRCVDGTLLQLTRQDFGL CCCCEEEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCH RKQFNDPLLGLEQPQLAENRQWIHYRCVVGSRAYGLDTPESDTDWRGFFVPAAAVDWGLA HHHCCCCCCCCCCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC TVPEQYEFVETQEHYWEVQKFLNLLLRANPNALECLYTDMVEHASPLALELRAMRHKLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SRIYQSHNSYVLAQFRLLERDLRTHGSLRWKHVMHLIRLLLSGIHALRHGELRLRHVAEH HHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC DQLMAIRAGELEWDTINRWRIALHAEFEQAYAATKLPILPDLAAANAWLLQVRRAQVD CCEEEEECCCCCCCCCCEEEEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA