| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899491
Identifier: 159899491
GI number: 159899491
Start: 3751704
End: 3752204
Strand: Reverse
Name: 159899491
Synonym: Haur_2972
Alternate gene names: NA
Gene position: 3752204-3751704 (Counterclockwise)
Preceding gene: 159899493
Following gene: 159899490
Centisome position: 59.12
GC content: 51.7
Gene sequence:
>501_bases ATGGAATTTGAACTAACCAATGCTCAGCGCGAGGCGATGCTTCAGGCTTGGCAAACGCTAAGTGACCAAGCATTGCCTGA GGAGCGGCTTTCGTTTGCTGGGTTACAAGCATTGCCACGTTTGGTTGAGCAAGCACTGAACAACGGTGATCAAACGAGCC TCACCGCAAGCTTAATCAACCCAATCTATTGGCATCAAACTGCCAGTTATGGTCATGGCTTGTTGGCCCGCGAACGGCGA GTGCCAATCGATCATGCGGCCTATCGCTTGAGTTGGTGGCTCTGGCTGCGACTTTACAATCTTGCCAATGCCCAGCTTTG GTTTGATCAAGGTTTGCGCTATGCCACGCTTGGGCAGTTTACTGCTGAGCATCAAGAGCCAGCTGCTTGCCCGCTCCAAA ATGGAATCCAGGTTGAATTGGCGGCAGTGCTTGAGCAACGCCTGCTTGTGCCAAGTGGCTTTCATTGTTGTCATGGTTTA GTCGCAAGCAACAAGGCTTGA
Upstream 100 bases:
>100_bases CACTAAAAGCTGCATTTGAAATTGCTCCTGATTGCCAAATTGCAGGCCATTGTGCGGCCAAGCTCAATCTATGTCAATCG GAGCCAGCGAGAATTAATTG
Downstream 100 bases:
>100_bases AATATGAACGCAGAGGCGCAGAGGGTGTATGGCTCAAGGCTATAGGTTATTAGGTTTTGATGCTCCAATGTATCTCCGAT AGCCCATAGCCTTGAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MEFELTNAQREAMLQAWQTLSDQALPEERLSFAGLQALPRLVEQALNNGDQTSLTASLINPIYWHQTASYGHGLLARERR VPIDHAAYRLSWWLWLRLYNLANAQLWFDQGLRYATLGQFTAEHQEPAACPLQNGIQVELAAVLEQRLLVPSGFHCCHGL VASNKA
Sequences:
>Translated_166_residues MEFELTNAQREAMLQAWQTLSDQALPEERLSFAGLQALPRLVEQALNNGDQTSLTASLINPIYWHQTASYGHGLLARERR VPIDHAAYRLSWWLWLRLYNLANAQLWFDQGLRYATLGQFTAEHQEPAACPLQNGIQVELAAVLEQRLLVPSGFHCCHGL VASNKA >Mature_166_residues MEFELTNAQREAMLQAWQTLSDQALPEERLSFAGLQALPRLVEQALNNGDQTSLTASLINPIYWHQTASYGHGLLARERR VPIDHAAYRLSWWLWLRLYNLANAQLWFDQGLRYATLGQFTAEHQEPAACPLQNGIQVELAAVLEQRLLVPSGFHCCHGL VASNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18751; Mature: 18751
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFELTNAQREAMLQAWQTLSDQALPEERLSFAGLQALPRLVEQALNNGDQTSLTASLIN CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PIYWHQTASYGHGLLARERRVPIDHAAYRLSWWLWLRLYNLANAQLWFDQGLRYATLGQF HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH TAEHQEPAACPLQNGIQVELAAVLEQRLLVPSGFHCCHGLVASNKA HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MEFELTNAQREAMLQAWQTLSDQALPEERLSFAGLQALPRLVEQALNNGDQTSLTASLIN CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH PIYWHQTASYGHGLLARERRVPIDHAAYRLSWWLWLRLYNLANAQLWFDQGLRYATLGQF HHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH TAEHQEPAACPLQNGIQVELAAVLEQRLLVPSGFHCCHGLVASNKA HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA