| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899493
Identifier: 159899493
GI number: 159899493
Start: 3752721
End: 3753119
Strand: Reverse
Name: 159899493
Synonym: Haur_2974
Alternate gene names: NA
Gene position: 3753119-3752721 (Counterclockwise)
Preceding gene: 159899494
Following gene: 159899491
Centisome position: 59.14
GC content: 50.13
Gene sequence:
>399_bases ATGGCGGTTTTTGTGGAACAAGAAGCCATTTTAGAATTATTACAAACCTCGCGAGCAGCTAGTTTGGCGGCGATGCAGTA TGTGCAGCCCGCCGATTTAGCCCAATTAATTGCCTTAGAGCAACAAGCTACCTATGATTGTGCTGCCCATGCCAATCAGT CGCCACAGCTGGTTGATGCAGCCAACAGCCTTGATCAATGGCAACAACAACGCCAACAACTGGCCCAAGCCATCGCGGCA ATTCCATGGGCTGGCTATACTCAGCGCATCCAAACGGCAGCAGGAGCGTTGTATTTAGGCGAGTTGGTTAAGCGTTTGAT TGCCGCCGAGCATCAGCAATTATCACAACTTTTGCATGCGGGCCAGCATCCAGCGATTATTGACCAATGGGCTGATTAA
Upstream 100 bases:
>100_bases CAGGTCTAGCCGAAAGCCCTTCCCCCGACTGATTGCAAATCAATCACGGTACGTATCATAGAGAGTGCGTACCGTGATTT GCGGTTAATAAGGAGTTACC
Downstream 100 bases:
>100_bases GCCGATTTGCGCTGGATAAACCAATCGAGCGCATACAGGTAGCCTTGCCAACCAAGCCCGCTAATTTGGCCTTGGGCAAT TGCCGCCACCACTGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MAVFVEQEAILELLQTSRAASLAAMQYVQPADLAQLIALEQQATYDCAAHANQSPQLVDAANSLDQWQQQRQQLAQAIAA IPWAGYTQRIQTAAGALYLGELVKRLIAAEHQQLSQLLHAGQHPAIIDQWAD
Sequences:
>Translated_132_residues MAVFVEQEAILELLQTSRAASLAAMQYVQPADLAQLIALEQQATYDCAAHANQSPQLVDAANSLDQWQQQRQQLAQAIAA IPWAGYTQRIQTAAGALYLGELVKRLIAAEHQQLSQLLHAGQHPAIIDQWAD >Mature_131_residues AVFVEQEAILELLQTSRAASLAAMQYVQPADLAQLIALEQQATYDCAAHANQSPQLVDAANSLDQWQQQRQQLAQAIAAI PWAGYTQRIQTAAGALYLGELVKRLIAAEHQQLSQLLHAGQHPAIIDQWAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14455; Mature: 14324
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFVEQEAILELLQTSRAASLAAMQYVQPADLAQLIALEQQATYDCAAHANQSPQLVDA CCEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ANSLDQWQQQRQQLAQAIAAIPWAGYTQRIQTAAGALYLGELVKRLIAAEHQQLSQLLHA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQHPAIIDQWAD CCCCCHHCCCCC >Mature Secondary Structure AVFVEQEAILELLQTSRAASLAAMQYVQPADLAQLIALEQQATYDCAAHANQSPQLVDA CEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ANSLDQWQQQRQQLAQAIAAIPWAGYTQRIQTAAGALYLGELVKRLIAAEHQQLSQLLHA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQHPAIIDQWAD CCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA