| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899446
Identifier: 159899446
GI number: 159899446
Start: 3700945
End: 3702900
Strand: Reverse
Name: 159899446
Synonym: Haur_2927
Alternate gene names: NA
Gene position: 3702900-3700945 (Counterclockwise)
Preceding gene: 159899447
Following gene: 159899444
Centisome position: 58.34
GC content: 44.02
Gene sequence:
>1956_bases ATGTTTAAGCGTCTTGTGGGATTATTTCTTTGCGGCACGATTGTGCTTGGGCTGAGTGCTTGTCAACCAAGCCAAAGCCA ATCGACAGCTACGGCCCAAATCACAGCATCGATTGAAACTCAAGCCCAAGCAAACCCAACCCAACGAACCCAGCATTCAG CAACGCCATCGCTGGTAGCAACCAACGAGCCAGTAACGCCAACTGAGGCGGCCCAAGTTTTGGCAACACCAACGGTTGAG CCAACCATAGCACCAAGCCCAACCCCTTTTACAGCTAGCATTGAACCATTGCCCGATCCAATTTTGATCAACGAGCCACT GCCAAGCCTTATGCCAACGACGCTTGATCCACCGCTAACCTTTGATTTGAATGATCAAACAACCTATGCCAATCCGGTAC TATTACCAGAACGTCGTGTCGAAACGATCAATTTGGCAAGCTTGCCTAACCTCAGTCTCTTACAAAAAATTGGTTTGGGT GACGTAATTGATCTTGCGATTGCGCCGAATAATCAATTTATTGCGATTGCAACGGCGATCAATATTGTGGTGTATGATCT ACCAAGTTTAGAGCAACGCTATGTTGCTCAAGTTCCGGCAACGATCTACAACCTTAGCATTAGTGCTGATAGTGCCACGA TTAACCTATTGCTCAACCCCGATTTAATTAATCCTGCTCCAGCTAAGGCAACGCTTCGCCGTTACGTAAGCCAAACAGGC GCGTTTCTTGATGAGACTGAGCAGATGGTTGATGTGAACCAATGGGATGCAAGTGAACCACGCATTGGAACCCAATCAAT TCCAAATCATGCTGGTGGTTATGGTGCTTATAGCCCAAATCAAGCATTTTTCGCCCAGCTTGAGCCGCCACCAGGTTTAG CGGTTGGCTTAGGAGTAGCCATCGAGCGGGTCATCGATCAAACAACGATTTATACTGATGAGCAGTCGCTGTATCTACGA TTTAGCCCTGATAGTACCTATGCTGCGGTGTTTTTTCAGCACTCGATTCAATTGATCGATTTGAATTCAGCAGTTGTCAC GTCGTTGGTTATTCCAGCTTACACGTATGGCAATTTCAGCCCCGACAATACCCTCTATGCAACGGGTGATGGTTTTCAAT TGCTCGATGTGAATCAAGCACGCCTTTTCAAAACTTTTCCAAATCAGCCGATTGATACGATGTATCGCACCTATACCCGC CCAACATTTAGTAGCGATGGTCAACGCATCAGCAATGGCGAAAATATTTGGGCGGTTAATCAAGATCCACCATTAATTCG CCAGCAACGATTGCCATTCTTTGGTGATGTAGCTTCGGGCATGGCGATTGTTCATGGTGCAAACGATTGGATAGTAACCA GCGAAAAGCAATTTACTGGAATGAATGAGCCACTTGCGCTAAAACTTTTCCAAGCCGATCAGCTGCATAGTAGCTTTACC GTTACTAAAACCTTAAATGATGCCTATTTTAGCGCTGATGGGAAGCAAATTGGCTTTATTTTCAATAATAACGAATTACA GATCTACGATCTAGCGCTTAAATCATTTATTCAAGCTAGGATATTTCCGTATCCAGTCAGAGAATTATCATTTAGCAGCG ATAATAATTCCATTATTGCAAGCTTCGAGGAAAATCCTCAGTCAATTATTGCAGCATTGCTTAATCGCAACGATTTAAGT ATTGTCAGAACTTTTGGCGCAGTTGAAGGTCAATTTGCGATTGATTATGATAATATAAGGTATCAATCATATCGAAAAAG TGTTCCTATCCAAATCGTTAACAATGCTGATTTTATGATCATTCCGGTTAATTTGCCTGATCATACAGCGATTGTCTATC GACTCAGCGATGGAATGCCAATGTATCGGATCAAACAAGGCATGCTTTCGCCTGATAATCGGCTTTATCTAGCGATTGAA GGCGGGCAAATACAGTTGTGGGGAATGCGACAATAA
Upstream 100 bases:
>100_bases CGATTAGTTCTCAGTTAATTATGAGCCAACTATCAGCCCCGTATGATGTCGTGTCGCAACTCCTTCTTAGATGATAGAGC TATGCATCTAAGGAGGAGTT
Downstream 100 bases:
>100_bases CTCACGAAAGCAGCAAAGCTAGCAATGGTTGAATCGCTCAAGGCTGAACCATTAAACTAAAAAAAACCTCGCCCGCTGCT GTGGGCGAGGGAACACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE GGQIQLWGMRQ
Sequences:
>Translated_651_residues MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE GGQIQLWGMRQ >Mature_651_residues MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE GGQIQLWGMRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71642; Mature: 71642
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEE TNEPVTPTEAAQVLATPTVEPTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLT CCCCCCHHHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEE FDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLGDVIDLAIAPNNQFIAIATAI EECCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE NIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG EEEEECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVA CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH IERVIDQTTIYTDEQSLYLRFSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFS HHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCHHHHHHHHHCCEECCCCC PDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTRPTFSSDGQRISNGENIWAVN CCCEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC QDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT CCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCEE VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIA EEEECCCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHEEECCCCCCEEE SFEENPQSIIAALLNRNDLSIVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMI EECCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEECCCCEEE IPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIEGGQIQLWGMRQ EEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECC >Mature Secondary Structure MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEE TNEPVTPTEAAQVLATPTVEPTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLT CCCCCCHHHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEE FDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLGDVIDLAIAPNNQFIAIATAI EECCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE NIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG EEEEECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVA CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH IERVIDQTTIYTDEQSLYLRFSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFS HHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCHHHHHHHHHCCEECCCCC PDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTRPTFSSDGQRISNGENIWAVN CCCEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC QDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT CCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCEE VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIA EEEECCCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHEEECCCCCCEEE SFEENPQSIIAALLNRNDLSIVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMI EECCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEECCCCEEE IPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIEGGQIQLWGMRQ EEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA