Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899446

Identifier: 159899446

GI number: 159899446

Start: 3700945

End: 3702900

Strand: Reverse

Name: 159899446

Synonym: Haur_2927

Alternate gene names: NA

Gene position: 3702900-3700945 (Counterclockwise)

Preceding gene: 159899447

Following gene: 159899444

Centisome position: 58.34

GC content: 44.02

Gene sequence:

>1956_bases
ATGTTTAAGCGTCTTGTGGGATTATTTCTTTGCGGCACGATTGTGCTTGGGCTGAGTGCTTGTCAACCAAGCCAAAGCCA
ATCGACAGCTACGGCCCAAATCACAGCATCGATTGAAACTCAAGCCCAAGCAAACCCAACCCAACGAACCCAGCATTCAG
CAACGCCATCGCTGGTAGCAACCAACGAGCCAGTAACGCCAACTGAGGCGGCCCAAGTTTTGGCAACACCAACGGTTGAG
CCAACCATAGCACCAAGCCCAACCCCTTTTACAGCTAGCATTGAACCATTGCCCGATCCAATTTTGATCAACGAGCCACT
GCCAAGCCTTATGCCAACGACGCTTGATCCACCGCTAACCTTTGATTTGAATGATCAAACAACCTATGCCAATCCGGTAC
TATTACCAGAACGTCGTGTCGAAACGATCAATTTGGCAAGCTTGCCTAACCTCAGTCTCTTACAAAAAATTGGTTTGGGT
GACGTAATTGATCTTGCGATTGCGCCGAATAATCAATTTATTGCGATTGCAACGGCGATCAATATTGTGGTGTATGATCT
ACCAAGTTTAGAGCAACGCTATGTTGCTCAAGTTCCGGCAACGATCTACAACCTTAGCATTAGTGCTGATAGTGCCACGA
TTAACCTATTGCTCAACCCCGATTTAATTAATCCTGCTCCAGCTAAGGCAACGCTTCGCCGTTACGTAAGCCAAACAGGC
GCGTTTCTTGATGAGACTGAGCAGATGGTTGATGTGAACCAATGGGATGCAAGTGAACCACGCATTGGAACCCAATCAAT
TCCAAATCATGCTGGTGGTTATGGTGCTTATAGCCCAAATCAAGCATTTTTCGCCCAGCTTGAGCCGCCACCAGGTTTAG
CGGTTGGCTTAGGAGTAGCCATCGAGCGGGTCATCGATCAAACAACGATTTATACTGATGAGCAGTCGCTGTATCTACGA
TTTAGCCCTGATAGTACCTATGCTGCGGTGTTTTTTCAGCACTCGATTCAATTGATCGATTTGAATTCAGCAGTTGTCAC
GTCGTTGGTTATTCCAGCTTACACGTATGGCAATTTCAGCCCCGACAATACCCTCTATGCAACGGGTGATGGTTTTCAAT
TGCTCGATGTGAATCAAGCACGCCTTTTCAAAACTTTTCCAAATCAGCCGATTGATACGATGTATCGCACCTATACCCGC
CCAACATTTAGTAGCGATGGTCAACGCATCAGCAATGGCGAAAATATTTGGGCGGTTAATCAAGATCCACCATTAATTCG
CCAGCAACGATTGCCATTCTTTGGTGATGTAGCTTCGGGCATGGCGATTGTTCATGGTGCAAACGATTGGATAGTAACCA
GCGAAAAGCAATTTACTGGAATGAATGAGCCACTTGCGCTAAAACTTTTCCAAGCCGATCAGCTGCATAGTAGCTTTACC
GTTACTAAAACCTTAAATGATGCCTATTTTAGCGCTGATGGGAAGCAAATTGGCTTTATTTTCAATAATAACGAATTACA
GATCTACGATCTAGCGCTTAAATCATTTATTCAAGCTAGGATATTTCCGTATCCAGTCAGAGAATTATCATTTAGCAGCG
ATAATAATTCCATTATTGCAAGCTTCGAGGAAAATCCTCAGTCAATTATTGCAGCATTGCTTAATCGCAACGATTTAAGT
ATTGTCAGAACTTTTGGCGCAGTTGAAGGTCAATTTGCGATTGATTATGATAATATAAGGTATCAATCATATCGAAAAAG
TGTTCCTATCCAAATCGTTAACAATGCTGATTTTATGATCATTCCGGTTAATTTGCCTGATCATACAGCGATTGTCTATC
GACTCAGCGATGGAATGCCAATGTATCGGATCAAACAAGGCATGCTTTCGCCTGATAATCGGCTTTATCTAGCGATTGAA
GGCGGGCAAATACAGTTGTGGGGAATGCGACAATAA

Upstream 100 bases:

>100_bases
CGATTAGTTCTCAGTTAATTATGAGCCAACTATCAGCCCCGTATGATGTCGTGTCGCAACTCCTTCTTAGATGATAGAGC
TATGCATCTAAGGAGGAGTT

Downstream 100 bases:

>100_bases
CTCACGAAAGCAGCAAAGCTAGCAATGGTTGAATCGCTCAAGGCTGAACCATTAAACTAAAAAAAACCTCGCCCGCTGCT
GTGGGCGAGGGAACACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE
PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG
DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG
AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR
FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR
PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT
VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS
IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE
GGQIQLWGMRQ

Sequences:

>Translated_651_residues
MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE
PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG
DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG
AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR
FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR
PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT
VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS
IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE
GGQIQLWGMRQ
>Mature_651_residues
MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVATNEPVTPTEAAQVLATPTVE
PTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLTFDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLG
DVIDLAIAPNNQFIAIATAINIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG
AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVAIERVIDQTTIYTDEQSLYLR
FSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFSPDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTR
PTFSSDGQRISNGENIWAVNQDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT
VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIASFEENPQSIIAALLNRNDLS
IVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMIIPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIE
GGQIQLWGMRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71642; Mature: 71642

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEE
TNEPVTPTEAAQVLATPTVEPTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLT
CCCCCCHHHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEE
FDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLGDVIDLAIAPNNQFIAIATAI
EECCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE
NIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG
EEEEECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVA
CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH
IERVIDQTTIYTDEQSLYLRFSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFS
HHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCHHHHHHHHHCCEECCCCC
PDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTRPTFSSDGQRISNGENIWAVN
CCCEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
QDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT
CCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCEE
VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIA
EEEECCCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHEEECCCCCCEEE
SFEENPQSIIAALLNRNDLSIVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMI
EECCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEECCCCEEE
IPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIEGGQIQLWGMRQ
EEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECC
>Mature Secondary Structure
MFKRLVGLFLCGTIVLGLSACQPSQSQSTATAQITASIETQAQANPTQRTQHSATPSLVA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHCCCCCCEEE
TNEPVTPTEAAQVLATPTVEPTIAPSPTPFTASIEPLPDPILINEPLPSLMPTTLDPPLT
CCCCCCHHHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEE
FDLNDQTTYANPVLLPERRVETINLASLPNLSLLQKIGLGDVIDLAIAPNNQFIAIATAI
EECCCCCCCCCCEECCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE
NIVVYDLPSLEQRYVAQVPATIYNLSISADSATINLLLNPDLINPAPAKATLRRYVSQTG
EEEEECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
AFLDETEQMVDVNQWDASEPRIGTQSIPNHAGGYGAYSPNQAFFAQLEPPPGLAVGLGVA
CHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH
IERVIDQTTIYTDEQSLYLRFSPDSTYAAVFFQHSIQLIDLNSAVVTSLVIPAYTYGNFS
HHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCHHHHHHHHHCCEECCCCC
PDNTLYATGDGFQLLDVNQARLFKTFPNQPIDTMYRTYTRPTFSSDGQRISNGENIWAVN
CCCEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
QDPPLIRQQRLPFFGDVASGMAIVHGANDWIVTSEKQFTGMNEPLALKLFQADQLHSSFT
CCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCEE
VTKTLNDAYFSADGKQIGFIFNNNELQIYDLALKSFIQARIFPYPVRELSFSSDNNSIIA
EEEECCCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCCCHHHEEECCCCCCEEE
SFEENPQSIIAALLNRNDLSIVRTFGAVEGQFAIDYDNIRYQSYRKSVPIQIVNNADFMI
EECCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEECCCCEEE
IPVNLPDHTAIVYRLSDGMPMYRIKQGMLSPDNRLYLAIEGGQIQLWGMRQ
EEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA