BacMap

Definition	Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession	NC_009972
Length	6,346,587

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The map label for this gene is fabG [H]

Identifier: 159899438

GI number: 159899438

Start: 3692913

End: 3693626

Strand: Reverse

Name: fabG [H]

Synonym: Haur_2919

Alternate gene names: 159899438

Gene position: 3693626-3692913 (Counterclockwise)

Preceding gene: 159899439

Following gene: 159899437

Centisome position: 58.2

GC content: 51.54

Gene sequence:

>714_bases
ATGAATCATGGCTGGGCCATCGTCACGGGCGGCGCTCGGCGCTTGGGCAAATCAATTGCGCTGGAATTAGCCCGCGCTGG
CTACAATTTAATTATTCACTACAATGCGGCTCAGGCTGAGGCCGAACAAACCTGTAGCGAGATTCAGGCACTTGGGCGTG
AGGCATGGGCTTATAGCGCCGATCTGCGCGATGTGGCTGCAATTGAGACAATGTTTCAAATAATTGGCGAACGTTGTGGC
AAATTGGCAGTTTTGGTCAATAGTGCTGCCGATTTTCCGCGCACACCGATTGGTAGCGTGAGCCAGCAAACCTGGGACGA
TTTGGTTGCGCTCAATCAACGTGCCCCGTTTTTTTGTGCTCAGGCTGCCGCCAAACTCATGCCTGACCATGGGGTGATTG
TGAATATTGTTGATGTTGGTGGCGAAGTGCCATGGCCTAGTTTTGTGCCTTATGGCATGACCAAAGCTGCATTAATCATG
ATGACCCGTGGTTTAGCATTAGCTTTGGCTCCTACTATTCGGGTTGGGGCAGTTGGGCCAGGCGTAGCACTTTTGCCTGA
TGGTTGGCAAGAAGACCACAATTCATTAAACAAAATTCCCTTGAAACGGCTGGGCGTGCCCGAAGATATCGCCAAAGCTG
TGCGTTTTATCGTCGAATCGCCCTATTTTACCGGCGAAACCATCTTTGTTGATGGCGGTCGTCGCTGGGCCTAA

Upstream 100 bases:

>100_bases
AAAGTGCAATGCTCTATCCATTTGGTTATCCCTATAGTTTTGTTGCCAATCAGGTGCATCAATTTTTGTTAATTTTTCAG
AAGCAAGCAGAGGGTGAATT

Downstream 100 bases:

>100_bases
GGAGCATCCTACATCCATGAGTCAAATTTCATTAACCCACGAAGTCGTTAAACCACGCCAAACCAGTGCCGAGGCTAAAG
CGCCCTTGTTGGTCATGTTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNHGWAIVTGGARRLGKSIALELARAGYNLIIHYNAAQAEAEQTCSEIQALGREAWAYSADLRDVAAIETMFQIIGERCG
KLAVLVNSAADFPRTPIGSVSQQTWDDLVALNQRAPFFCAQAAAKLMPDHGVIVNIVDVGGEVPWPSFVPYGMTKAALIM
MTRGLALALAPTIRVGAVGPGVALLPDGWQEDHNSLNKIPLKRLGVPEDIAKAVRFIVESPYFTGETIFVDGGRRWA

Sequences:

>Translated_237_residues
MNHGWAIVTGGARRLGKSIALELARAGYNLIIHYNAAQAEAEQTCSEIQALGREAWAYSADLRDVAAIETMFQIIGERCG
KLAVLVNSAADFPRTPIGSVSQQTWDDLVALNQRAPFFCAQAAAKLMPDHGVIVNIVDVGGEVPWPSFVPYGMTKAALIM
MTRGLALALAPTIRVGAVGPGVALLPDGWQEDHNSLNKIPLKRLGVPEDIAKAVRFIVESPYFTGETIFVDGGRRWA
>Mature_237_residues
MNHGWAIVTGGARRLGKSIALELARAGYNLIIHYNAAQAEAEQTCSEIQALGREAWAYSADLRDVAAIETMFQIIGERCG
KLAVLVNSAADFPRTPIGSVSQQTWDDLVALNQRAPFFCAQAAAKLMPDHGVIVNIVDVGGEVPWPSFVPYGMTKAALIM
MTRGLALALAPTIRVGAVGPGVALLPDGWQEDHNSLNKIPLKRLGVPEDIAKAVRFIVESPYFTGETIFVDGGRRWA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=29.9595141700405, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI32483357, Length=240, Percent_Identity=28.3333333333333, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=31.9148936170213, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=28.9156626506024, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=26.5873015873016, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI126723750, Length=243, Percent_Identity=24.6913580246914, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI10190704, Length=240, Percent_Identity=27.9166666666667, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI209862901, Length=170, Percent_Identity=30.5882352941176, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI19923983, Length=170, Percent_Identity=30.5882352941176, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI33667109, Length=185, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1788459, Length=238, Percent_Identity=29.8319327731092, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=29.718875502008, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1790717, Length=238, Percent_Identity=28.9915966386555, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=30.4166666666667, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=241, Percent_Identity=29.4605809128631, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87082100, Length=246, Percent_Identity=29.6747967479675, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=29.2887029288703, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=29.2181069958848, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787891, Length=242, Percent_Identity=24.7933884297521, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=26.3598326359833, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=254, Percent_Identity=29.5275590551181, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=29.6747967479675, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=31.7991631799163, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.2868525896414, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=244, Percent_Identity=29.0983606557377, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=30.7377049180328, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=30.3643724696356, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=254, Percent_Identity=27.9527559055118, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=27.5720164609054, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=28.90625, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=254, Percent_Identity=28.740157480315, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=253, Percent_Identity=29.2490118577075, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555612, Length=183, Percent_Identity=30.0546448087432, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=29.1828793774319, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71997099, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=254, Percent_Identity=27.1653543307087, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=29.0697674418605, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=28.5123966942149, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24644337, Length=200, Percent_Identity=32.5, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=29.7959183673469, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=28.8617886178862, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=26.6129032258064, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24643142, Length=239, Percent_Identity=27.1966527196653, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25539; Mature: 25539

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHGWAIVTGGARRLGKSIALELARAGYNLIIHYNAAQAEAEQTCSEIQALGREAWAYSA
CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
DLRDVAAIETMFQIIGERCGKLAVLVNSAADFPRTPIGSVSQQTWDDLVALNQRAPFFCA
CHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
QAAAKLMPDHGVIVNIVDVGGEVPWPSFVPYGMTKAALIMMTRGLALALAPTIRVGAVGP
HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHEEECCCEEECCCCC
GVALLPDGWQEDHNSLNKIPLKRLGVPEDIAKAVRFIVESPYFTGETIFVDGGRRWA
CCEECCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNHGWAIVTGGARRLGKSIALELARAGYNLIIHYNAAQAEAEQTCSEIQALGREAWAYSA
CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
DLRDVAAIETMFQIIGERCGKLAVLVNSAADFPRTPIGSVSQQTWDDLVALNQRAPFFCA
CHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
QAAAKLMPDHGVIVNIVDVGGEVPWPSFVPYGMTKAALIMMTRGLALALAPTIRVGAVGP
HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHEEECCCEEECCCCC
GVALLPDGWQEDHNSLNKIPLKRLGVPEDIAKAVRFIVESPYFTGETIFVDGGRRWA
CCEECCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA