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The map label for this gene is yhdJ [C]

Identifier: 159899439

GI number: 159899439

Start: 3693623

End: 3694552

Strand: Reverse

Name: yhdJ [C]

Synonym: Haur_2920

Alternate gene names: 159899439

Gene position: 3694552-3693623 (Counterclockwise)

Preceding gene: 159899444

Following gene: 159899438

Centisome position: 58.21

GC content: 51.4

Gene sequence:

>930_bases
ATGAGCGATTCAGAAGCGCAACAGCCCCACCGTCGCAACCAGTTAAACGATTTATCGGGGCGCGAGTGGCTTTATGCAAC
GCGTTCGATTGCGCTAACTGGCACGCCACCAACGCCACTCAACGATTTAACTGCTGAAGAATGGGCGGCTTGGTCAGCCC
CAATTTTAGCCAGCGCTTACCCAACCCGTGGCCCTGCTTCGGCTGCCCATCATATTCGCAAAGCCCATCCATCGCCTAAA
CCACCAGCCTTGCTTAGCGAAATTATTCGTTTTTTTACCAAGCCCAACGGTTGGGTGCTCGACCCATTTGCTGGGGTTGG
CGGCACGCTGCTGGCTTGTGCCCAAACCCAACGCCAAGCAATCGGCATCGAATTATCGCCGCACTATATCGATTTGTATG
GACAGGCGGCTGATGCACTGAATTTGGCTCGTTTGCCAGTTTTGCAAGGCGATGCCCGTGAAGTACTCAACAGCCCAAGC
ATCCAGCAACAACGCTTTGATTTGGTGTTGACCGACCCACCCTATAGTTCAATGCTCAGTCGAGCACGCACTGGTCAGCG
TCGCAAACAGGGTAACGGCGCAGCCACGCCCTTCACCGATGATCCCGCCGATCTTGGCAATGTCGATTATCCAACCTTTC
TGCGTGAATTGACTTCAATTGTGGCGCAAACCTTGCAATCGTTGCGGGTTGGCGGCCATTTGGTGTTGTTTGTCAAAGAT
CTGCAACCAACCCCAGAGCATCATAACATGCTCCATGCCGATATCGTGTCAGCGTTGTATCAATTATCGCAGCTGCGCTA
TCGCGGCTATCGCATCTGGTACGATCAAAGTGCAATGCTCTATCCATTTGGTTATCCCTATAGTTTTGTTGCCAATCAGG
TGCATCAATTTTTGTTAATTTTTCAGAAGCAAGCAGAGGGTGAATTATGA

Upstream 100 bases:

>100_bases
CAGGCTAATCGACTGCACAGTTTATCCCATCAAGCATATCAAGATATTGGTTCAATGCTACAATAGCGCAACCAGTGTGT
CCGCGAAAGAAGGAGCCGTT

Downstream 100 bases:

>100_bases
ATCATGGCTGGGCCATCGTCACGGGCGGCGCTCGGCGCTTGGGCAAATCAATTGCGCTGGAATTAGCCCGCGCTGGCTAC
AATTTAATTATTCACTACAA

Product: DNA methylase N-4/N-6 domain-containing protein

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: DNA Methylase N-4/N-6 Domain-Containing Protein; Adenine-Specific DNA Methylase; DNA Methylase; Site-Specific DNA-Methyltransferase; DNA Methylase N-4/N-6 Domain Protein; DNA Methylase; DNA Methylase-Like Protein

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSDSEAQQPHRRNQLNDLSGREWLYATRSIALTGTPPTPLNDLTAEEWAAWSAPILASAYPTRGPASAAHHIRKAHPSPK
PPALLSEIIRFFTKPNGWVLDPFAGVGGTLLACAQTQRQAIGIELSPHYIDLYGQAADALNLARLPVLQGDAREVLNSPS
IQQQRFDLVLTDPPYSSMLSRARTGQRRKQGNGAATPFTDDPADLGNVDYPTFLRELTSIVAQTLQSLRVGGHLVLFVKD
LQPTPEHHNMLHADIVSALYQLSQLRYRGYRIWYDQSAMLYPFGYPYSFVANQVHQFLLIFQKQAEGEL

Sequences:

>Translated_309_residues
MSDSEAQQPHRRNQLNDLSGREWLYATRSIALTGTPPTPLNDLTAEEWAAWSAPILASAYPTRGPASAAHHIRKAHPSPK
PPALLSEIIRFFTKPNGWVLDPFAGVGGTLLACAQTQRQAIGIELSPHYIDLYGQAADALNLARLPVLQGDAREVLNSPS
IQQQRFDLVLTDPPYSSMLSRARTGQRRKQGNGAATPFTDDPADLGNVDYPTFLRELTSIVAQTLQSLRVGGHLVLFVKD
LQPTPEHHNMLHADIVSALYQLSQLRYRGYRIWYDQSAMLYPFGYPYSFVANQVHQFLLIFQKQAEGEL
>Mature_308_residues
SDSEAQQPHRRNQLNDLSGREWLYATRSIALTGTPPTPLNDLTAEEWAAWSAPILASAYPTRGPASAAHHIRKAHPSPKP
PALLSEIIRFFTKPNGWVLDPFAGVGGTLLACAQTQRQAIGIELSPHYIDLYGQAADALNLARLPVLQGDAREVLNSPSI
QQQRFDLVLTDPPYSSMLSRARTGQRRKQGNGAATPFTDDPADLGNVDYPTFLRELTSIVAQTLQSLRVGGHLVLFVKDL
QPTPEHHNMLHADIVSALYQLSQLRYRGYRIWYDQSAMLYPFGYPYSFVANQVHQFLLIFQKQAEGEL

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 34396; Mature: 34265

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSEAQQPHRRNQLNDLSGREWLYATRSIALTGTPPTPLNDLTAEEWAAWSAPILASAY
CCCCHHCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCC
PTRGPASAAHHIRKAHPSPKPPALLSEIIRFFTKPNGWVLDPFAGVGGTLLACAQTQRQA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
IGIELSPHYIDLYGQAADALNLARLPVLQGDAREVLNSPSIQQQRFDLVLTDPPYSSMLS
CCEEECCCEEEEECCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCCEEEECCCHHHHHH
RARTGQRRKQGNGAATPFTDDPADLGNVDYPTFLRELTSIVAQTLQSLRVGGHLVLFVKD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
LQPTPEHHNMLHADIVSALYQLSQLRYRGYRIWYDQSAMLYPFGYPYSFVANQVHQFLLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHH
FQKQAEGEL
HHHHCCCCC
>Mature Secondary Structure 
SDSEAQQPHRRNQLNDLSGREWLYATRSIALTGTPPTPLNDLTAEEWAAWSAPILASAY
CCCHHCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCC
PTRGPASAAHHIRKAHPSPKPPALLSEIIRFFTKPNGWVLDPFAGVGGTLLACAQTQRQA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
IGIELSPHYIDLYGQAADALNLARLPVLQGDAREVLNSPSIQQQRFDLVLTDPPYSSMLS
CCEEECCCEEEEECCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHCCEEEECCCHHHHHH
RARTGQRRKQGNGAATPFTDDPADLGNVDYPTFLRELTSIVAQTLQSLRVGGHLVLFVKD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
LQPTPEHHNMLHADIVSALYQLSQLRYRGYRIWYDQSAMLYPFGYPYSFVANQVHQFLLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHH
FQKQAEGEL
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA