| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899411
Identifier: 159899411
GI number: 159899411
Start: 3663592
End: 3664656
Strand: Reverse
Name: 159899411
Synonym: Haur_2892
Alternate gene names: NA
Gene position: 3664656-3663592 (Counterclockwise)
Preceding gene: 159899412
Following gene: 159899408
Centisome position: 57.74
GC content: 50.33
Gene sequence:
>1065_bases ATGAATGATGCAATGCTGACTGTCGCCACTGCCTTAGCTCAAATTCGCGCTGGGGTCGAAGATTTCGGTGGTCGCCCAAT TAATGGCACGTTGGTTTTAGATAACAATATTGAATTTTTGCCGCGTGGACTGGTGGCAACTGCCATCGAAGCCAAAAATT GCACCAAATTGCGCTATTTGCCCAAAGATTTGCATGCAGGGCGCTTAGATCTCAGTGGTTGTACCGGTTTGACCAGCATT CCTGAAGGTTTGCACTGTTTTGAACTTGATCTCCGTGGTACCAGCATTGAGCATTTGCCCTTGGTGCATGTGCAAAATCG GCTGAACCTGAGCAACAATATTCATCTCAAGAGTTTGCCGCGCAATCTCAAAGTTGGCTCGTTGGTGCTGCGCGGTTGCA GTGCGCTCGAAAGCCTGCCCGAAGGAATTGATGTTAATTTTCTTGATTTGACCGATTGTGTTAATTTTCGGCGTTGGCCA AGCACAGGCCGCATCAGCGTTGGACGGATTGTGGCTCGCAACTGTATCAACATGCCCAATTTGCCCAATTGGCTCGGCGA ATTGGCTCAGCTCAGTGTGCGTGGTTGCAGCAGCCTAACCGAATTGCCAGCAGGCTTGGTAGTCCACTCGTGGCTCGATT TGGGTAATACTGAAATTAGCTGCCTGCCTGCGGATAGCCAAGTTAGCCAATTGCGCTGGAATGGCGTGCCAATTGATGAG CGGATCGCCTTCCAACCTGAAACAATCAGCGTTAGCGAAATTATCGACGAAGTTAATGTTGAGCGGCGGCGGGTGTTGCT CGAACGCAAAGGCTACGAAGAATTTTTTGCCCAAGCTGAAGCCAAAGAGCTTGATCGCGACCGTGATACTGGTGGCGTGC GGCGCTTGTTGCAAATGCCCATGCCCAACGATGAAGATTTGGTTTGTTTGGCGGTGCAATGTCCTTCAACTGATCGACGC TATGTCTTGCGTGTGCCACCAACTATGCAGAGTTGCCATCAAGCCGCCGCTTGGATCGCGGGCTTCGATAACCCTGATGA TTACAAACTGCTGAAAGAAACCTAG
Upstream 100 bases:
>100_bases CAACGCGAATATTCACCCCAAGAAATTCGCCGAGTCGTTGATTAATGCTGCGACTGGTGGTAATACTCTCCTGTTACCAC CAGCCCTTGAGGATAGTTCG
Downstream 100 bases:
>100_bases TTTGTTAGCTAGTGCGAGCGTTCCCTCACCCCCAACCCCTCTCCCGCTGCGGCAGGCGAGGGGTGTTTGGTTTGGTGGTT CCCCCTCGCCTCGCGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET
Sequences:
>Translated_354_residues MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET >Mature_354_residues MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39296; Mature: 39296
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYL CCCHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHCCCCCCEEEEC PKDLHAGRLDLSGCTGLTSIPEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLP CHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCEEEECCC RNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWPSTGRISVGRIVARNCINMPN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCC LPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCC RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMP CEECCCCCEEHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC MPNDEDLVCLAVQCPSTDRRYVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET CCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYL CCCHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHCCCCCCEEEEC PKDLHAGRLDLSGCTGLTSIPEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLP CHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCEEEECCC RNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWPSTGRISVGRIVARNCINMPN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCC LPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCC RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMP CEECCCCCEEHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC MPNDEDLVCLAVQCPSTDRRYVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET CCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA