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The map label for this gene is uidR [C]

Identifier: 159899408

GI number: 159899408

Start: 3659780

End: 3660430

Strand: Reverse

Name: uidR [C]

Synonym: Haur_2889

Alternate gene names: 159899408

Gene position: 3660430-3659780 (Counterclockwise)

Preceding gene: 159899411

Following gene: 159899406

Centisome position: 57.68

GC content: 52.53

Gene sequence:

>651_bases
ATGAACCAACCTAACGAAAAACTCAGCGGTCGCCAGCCCGACAGCACCGCCCAACAAACCCGCCAGCGGATTTTGGTCAG
CGCTCGCACGCTCTTCGCAATGCAGGGCTTTGAAGGGATTAGTTTGCGCGACATTGCCAGCCATGCCGAGGTAACCCATG
GCTTATTGCGGCACCATTTTGGCTCGAAAGATGCGGTTTGGCAGGCGGTGGTCGATGCAGCGCTGGCCGAATATCTCGCG
GCCTTATTGCCATTGGTCAATAGCGCAATTGCCGAGCAGCACGAACCAAGCGCCGTGATCAAACGCTCACTTGCCACAAT
TATTCGGCTCTCGGCCAGCTTTTGCGAAGTACCATGTTTGATGGTGCACGAAAGCATTACTGGTGGCGAACGGCTGAATT
ATTTTATGCAGCAATTACGCCCGCTTAGCGCCATGATGCAGCCATTTTTCGAGGCTCTGCGGGCTGAAGGCAAATTTCAA
CAATTTAGCCATCCTACGTTTTTGCTCGCCGTGATTTCATTGGGGATTTTGCCCTTGGCGCTGGCTTCGTTCAGCAATGC
CTTGGCGCAAATCAATATTTTGGCTGAGGCTGAGCTTGAACTGCATATCGAGCGGGTGATTGCGACATTAATGCCTTGGA
CAACCAGTTAA

Upstream 100 bases:

>100_bases
TGTGTGAACCCATGGTGTGCGTCCCTGTCCGCCCTTAAACGCCGCAGTGGGAGAGGGGTTGGGGTGAGGGGATACTACTA
ATTCTAGAAATGACTTAACA

Downstream 100 bases:

>100_bases
TTAAAAAGAGCACGAACTAGGTTTCGTGCTCTGAAGTTTATCTGTAAGTGGCGATAATTACTCAGCGCTAATTCCAGCCC
GATCAGCCCAACCAGCCGGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNQPNEKLSGRQPDSTAQQTRQRILVSARTLFAMQGFEGISLRDIASHAEVTHGLLRHHFGSKDAVWQAVVDAALAEYLA
ALLPLVNSAIAEQHEPSAVIKRSLATIIRLSASFCEVPCLMVHESITGGERLNYFMQQLRPLSAMMQPFFEALRAEGKFQ
QFSHPTFLLAVISLGILPLALASFSNALAQINILAEAELELHIERVIATLMPWTTS

Sequences:

>Translated_216_residues
MNQPNEKLSGRQPDSTAQQTRQRILVSARTLFAMQGFEGISLRDIASHAEVTHGLLRHHFGSKDAVWQAVVDAALAEYLA
ALLPLVNSAIAEQHEPSAVIKRSLATIIRLSASFCEVPCLMVHESITGGERLNYFMQQLRPLSAMMQPFFEALRAEGKFQ
QFSHPTFLLAVISLGILPLALASFSNALAQINILAEAELELHIERVIATLMPWTTS
>Mature_216_residues
MNQPNEKLSGRQPDSTAQQTRQRILVSARTLFAMQGFEGISLRDIASHAEVTHGLLRHHFGSKDAVWQAVVDAALAEYLA
ALLPLVNSAIAEQHEPSAVIKRSLATIIRLSASFCEVPCLMVHESITGGERLNYFMQQLRPLSAMMQPFFEALRAEGKFQ
QFSHPTFLLAVISLGILPLALASFSNALAQINILAEAELELHIERVIATLMPWTTS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23830; Mature: 23830

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPNEKLSGRQPDSTAQQTRQRILVSARTLFAMQGFEGISLRDIASHAEVTHGLLRHHF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GSKDAVWQAVVDAALAEYLAALLPLVNSAIAEQHEPSAVIKRSLATIIRLSASFCEVPCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MVHESITGGERLNYFMQQLRPLSAMMQPFFEALRAEGKFQQFSHPTFLLAVISLGILPLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
LASFSNALAQINILAEAELELHIERVIATLMPWTTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNQPNEKLSGRQPDSTAQQTRQRILVSARTLFAMQGFEGISLRDIASHAEVTHGLLRHHF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GSKDAVWQAVVDAALAEYLAALLPLVNSAIAEQHEPSAVIKRSLATIIRLSASFCEVPCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MVHESITGGERLNYFMQQLRPLSAMMQPFFEALRAEGKFQQFSHPTFLLAVISLGILPLA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
LASFSNALAQINILAEAELELHIERVIATLMPWTTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA