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The map label for this gene is 159899260

Identifier: 159899260

GI number: 159899260

Start: 3497280

End: 3498188

Strand: Reverse

Name: 159899260

Synonym: Haur_2741

Alternate gene names: NA

Gene position: 3498188-3497280 (Counterclockwise)

Preceding gene: 159899261

Following gene: 159899259

Centisome position: 55.12

GC content: 49.61

Gene sequence:

>909_bases
ATGCCGACGACTGAGGCGTTGGTGCGGGCACGAGCCGAGTTGGAGTGTATTCAAGAGTTTGGCCGTATTATCCATAGTAC
CCGCGATCGGTTTGTGGTCTACGAGTCGTTTTATCAATTACTTGAGCAGGTTGTGCCGATCGATCACGGTACCATCAGCT
TTTTTGATGCGCAGCAGAATTTGCGCCATGTGTATGTGATTGCCCATCGGCGTGGTAATTTTGCCGATGAGCCAGTCACA
ATTAAACCGCATACGCCCAGCGCTTGGATTTTGCGTCAGCGCAAACCACTGTTGTTTGAAAATATCTACACTGATAGCCA
TAGCGAGATTAACCTTGAGCATGCGCTCGGAGCCGATTTGCACCACGCCAGTTGTAGTTGGCTGGGCTTGCCAATTATGT
TGGGCAGCCAATTGTTGGGCTTGGTGACGATTCAGCATCATGAAACGGCGGCGTATGGCGACCGCGAACTGCAATTGTTG
CAAACTCTCAGTTTAATGCTGGCCACGACGATCAACCAGATTCAACGAGTTGAAGAATTGGAAGTGCTGCGCTTGGCCTT
GAGCGCTCCCACAATTCCGGTTGATCAACATTTATGGATTGTGCCAGTGATTGGGCGGGTTGATCAACAGCGCCTCGCAA
TTTTGCAAACGATTCTTTTGGGCCATGTTGAGCGCCAACGGATTCGCTATGTGGTGCTCGATTTAACTGGCATGCGCTCA
TTTGACCCACAAGCAACTGGCTTATTCAATAAATTAATCGGCGCATTACGCTTATTGGGTGCAACTTGCATTGTTAGCGG
CGTGCAGGCCGAAAATAGCGCGGTGCTTAGCCCAATTTTGAGCCAGCATAATGTGCTGATTGTGCGTGATGTGCAGCAAA
GTTTGCGCTATCTCAAGCGCCAAATTTGA

Upstream 100 bases:

>100_bases
TTATCTTTTGCTTCGTGAGCCTGAATTTAACGAAGCTGTGGCAGTTCTGACGGCGGCTGGGCATCAGATTGGCTGAACCG
TGAGGCTGAAGGATTGAGCT

Downstream 100 bases:

>100_bases
GCGAGGTGAGTATGACAGCCTATGAAAGTAGCCGCCATCATCAGCCAGTTGAGCAAACGATTCTGGCGATTCATGAATTG
ATTCGGGCGATTTTGCTGCC

Product: putative phytochrome sensor protein

Products: NA

Alternate protein names: Phytochrome Sensor Protein

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPTTEALVRARAELECIQEFGRIIHSTRDRFVVYESFYQLLEQVVPIDHGTISFFDAQQNLRHVYVIAHRRGNFADEPVT
IKPHTPSAWILRQRKPLLFENIYTDSHSEINLEHALGADLHHASCSWLGLPIMLGSQLLGLVTIQHHETAAYGDRELQLL
QTLSLMLATTINQIQRVEELEVLRLALSAPTIPVDQHLWIVPVIGRVDQQRLAILQTILLGHVERQRIRYVVLDLTGMRS
FDPQATGLFNKLIGALRLLGATCIVSGVQAENSAVLSPILSQHNVLIVRDVQQSLRYLKRQI

Sequences:

>Translated_302_residues
MPTTEALVRARAELECIQEFGRIIHSTRDRFVVYESFYQLLEQVVPIDHGTISFFDAQQNLRHVYVIAHRRGNFADEPVT
IKPHTPSAWILRQRKPLLFENIYTDSHSEINLEHALGADLHHASCSWLGLPIMLGSQLLGLVTIQHHETAAYGDRELQLL
QTLSLMLATTINQIQRVEELEVLRLALSAPTIPVDQHLWIVPVIGRVDQQRLAILQTILLGHVERQRIRYVVLDLTGMRS
FDPQATGLFNKLIGALRLLGATCIVSGVQAENSAVLSPILSQHNVLIVRDVQQSLRYLKRQI
>Mature_301_residues
PTTEALVRARAELECIQEFGRIIHSTRDRFVVYESFYQLLEQVVPIDHGTISFFDAQQNLRHVYVIAHRRGNFADEPVTI
KPHTPSAWILRQRKPLLFENIYTDSHSEINLEHALGADLHHASCSWLGLPIMLGSQLLGLVTIQHHETAAYGDRELQLLQ
TLSLMLATTINQIQRVEELEVLRLALSAPTIPVDQHLWIVPVIGRVDQQRLAILQTILLGHVERQRIRYVVLDLTGMRSF
DPQATGLFNKLIGALRLLGATCIVSGVQAENSAVLSPILSQHNVLIVRDVQQSLRYLKRQI

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34239; Mature: 34108

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTEALVRARAELECIQEFGRIIHSTRDRFVVYESFYQLLEQVVPIDHGTISFFDAQQN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEHHCC
LRHVYVIAHRRGNFADEPVTIKPHTPSAWILRQRKPLLFENIYTDSHSEINLEHALGADL
CEEEEEEEECCCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHCCCCCCCEEHHHHCCCCC
HHASCSWLGLPIMLGSQLLGLVTIQHHETAAYGDRELQLLQTLSLMLATTINQIQRVEEL
CCCCCCHHCHHHHHHHHHHHHEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLRLALSAPTIPVDQHLWIVPVIGRVDQQRLAILQTILLGHVERQRIRYVVLDLTGMRS
HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
FDPQATGLFNKLIGALRLLGATCIVSGVQAENSAVLSPILSQHNVLIVRDVQQSLRYLKR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH
QI
CC
>Mature Secondary Structure 
PTTEALVRARAELECIQEFGRIIHSTRDRFVVYESFYQLLEQVVPIDHGTISFFDAQQN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEHHCC
LRHVYVIAHRRGNFADEPVTIKPHTPSAWILRQRKPLLFENIYTDSHSEINLEHALGADL
CEEEEEEEECCCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHCCCCCCCEEHHHHCCCCC
HHASCSWLGLPIMLGSQLLGLVTIQHHETAAYGDRELQLLQTLSLMLATTINQIQRVEEL
CCCCCCHHCHHHHHHHHHHHHEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLRLALSAPTIPVDQHLWIVPVIGRVDQQRLAILQTILLGHVERQRIRYVVLDLTGMRS
HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
FDPQATGLFNKLIGALRLLGATCIVSGVQAENSAVLSPILSQHNVLIVRDVQQSLRYLKR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH
QI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA