Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899261

Identifier: 159899261

GI number: 159899261

Start: 3498213

End: 3498593

Strand: Reverse

Name: 159899261

Synonym: Haur_2742

Alternate gene names: NA

Gene position: 3498593-3498213 (Counterclockwise)

Preceding gene: 159899262

Following gene: 159899260

Centisome position: 55.13

GC content: 48.29

Gene sequence:

>381_bases
ATGCATCAATTGAAATTAACCATCTATCCCGAAATGTTGGCGGTTGCTCGTTTGAATGTTGATCAGCCATGGCCGGAATG
GGCCTTGCAAAGCCCATTTGTGAGTATCAGCCGTACCACTGATGAATTATCGATCGTGTGTGAAACTAAATGTGTGCCCG
CAAACGTCCAAGCTGAGCGCAATTGGCGTGGGCTGCGGGTCGTAGGCACATTAGATTTTAGCCAAGTTGGGATTTTGGCC
AGTTTAGCAGCGCCGCTAGCTCAAGCCCAGATCAGTATTTTTGTGCTATCAACCTATGATACCGATTATCTTTTGCTTCG
TGAGCCTGAATTTAACGAAGCTGTGGCAGTTCTGACGGCGGCTGGGCATCAGATTGGCTGA

Upstream 100 bases:

>100_bases
GGCGAAGTACCTTCGCGACGTTATTTGGGCTTTACCCTGCCAAATGCTTTTTTTGTGGTGTTGGGAGCGCTATTTGCAGC
CCAGCGGGTTCGTGAGTAAC

Downstream 100 bases:

>100_bases
ACCGTGAGGCTGAAGGATTGAGCTATGCCGACGACTGAGGCGTTGGTGCGGGCACGAGCCGAGTTGGAGTGTATTCAAGA
GTTTGGCCGTATTATCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MHQLKLTIYPEMLAVARLNVDQPWPEWALQSPFVSISRTTDELSIVCETKCVPANVQAERNWRGLRVVGTLDFSQVGILA
SLAAPLAQAQISIFVLSTYDTDYLLLREPEFNEAVAVLTAAGHQIG

Sequences:

>Translated_126_residues
MHQLKLTIYPEMLAVARLNVDQPWPEWALQSPFVSISRTTDELSIVCETKCVPANVQAERNWRGLRVVGTLDFSQVGILA
SLAAPLAQAQISIFVLSTYDTDYLLLREPEFNEAVAVLTAAGHQIG
>Mature_126_residues
MHQLKLTIYPEMLAVARLNVDQPWPEWALQSPFVSISRTTDELSIVCETKCVPANVQAERNWRGLRVVGTLDFSQVGILA
SLAAPLAQAQISIFVLSTYDTDYLLLREPEFNEAVAVLTAAGHQIG

Specific function: Unknown

COG id: COG3603

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13939; Mature: 13939

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQLKLTIYPEMLAVARLNVDQPWPEWALQSPFVSISRTTDELSIVCETKCVPANVQAER
CCEEEEEECHHHEEEEECCCCCCCCCCHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
NWRGLRVVGTLDFSQVGILASLAAPLAQAQISIFVLSTYDTDYLLLREPEFNEAVAVLTA
CCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEE
AGHQIG
CCCCCC
>Mature Secondary Structure
MHQLKLTIYPEMLAVARLNVDQPWPEWALQSPFVSISRTTDELSIVCETKCVPANVQAER
CCEEEEEECHHHEEEEECCCCCCCCCCHHCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
NWRGLRVVGTLDFSQVGILASLAAPLAQAQISIFVLSTYDTDYLLLREPEFNEAVAVLTA
CCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEE
AGHQIG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA