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The map label for this gene is 159899212

Identifier: 159899212

GI number: 159899212

Start: 3449740

End: 3450720

Strand: Direct

Name: 159899212

Synonym: Haur_2693

Alternate gene names: NA

Gene position: 3449740-3450720 (Clockwise)

Preceding gene: 159899207

Following gene: 159899213

Centisome position: 54.36

GC content: 52.6

Gene sequence:

>981_bases
ATGTTGCCACCAGCTTTGCGGGTTGCCTTAGAACGTGAGTTAACTGGCACTGATCAACGGCGTTTAGCGGCGGCAGCCAG
CGGGCTTTCCGAGCGCTACCGTGCAGGCCATAGCCGCACGACCGCGCCATTTGTGCAAAATGCCGCCGATGTGTTGGCCT
ACGCCGCCACGCGCATGCCCGCAACCCTCGGGGCCATCAAAGCCGCTTGTGCTGAAATCGCCCAACGCCAACCAAACTTC
CAGCCTCAAACGCAGCTTGATTTGGGAGCTGGCACTGGAGCAGCAACCTGGGCCGCCAGCCAAACATGGTCAAGTTTGCT
GCAGCATCAGTTAATTGAACGTGAAAACACCATGTTGCAACTTGGTCAACGGTTAATGCAGGCTGGGCCAACTTCGCTCC
AACAAGCTCGCTGGCAACAAGCCAATTTACCCAATGCCAATGCCTTGGGTAATTATGATTTGGTGACGATTGGCTATGTG
TTGGGTGAATTAAACGCAACTCAGCGCCAACAATTATTGCTCCAAGCATGGCAAGCCAGCAGCGGTGTATTGTTAATTGT
TGAGCCAGGCACACCGCGCGGCTTTGAATTGATTTTGGCAGCTCGCACGTTTTTACTCGAACAACAAGCCCATTTAATTG
CGCCATGTCCTCATCAACAAACGTGCCCAATGCAAGCCAACGATTGGTGTCATTTTGCCACCCGCATCGAACGCACCCGC
TTCCATCGTAGCTTAAAAGCTGCCGAGTTGGGCTACGAAGATGAAAAATCGAGCTATATTGCGGTTAGTCGCCAATCAAG
CCAGCTAGCGCAAGCACGAGTTATTCGCCACCCCTCGCAACAACCACAGCGCATCCAATTGCAACTCTGCACACCCCAAG
GCCTTAGGAGCATAACGATTAATAAACGTGATGCCCAATGGAAACAAGCGCGAAAAGCCGAATGGGGTGATAGCTTCGAG
CTAAACCCAACCCAAGATTAA

Upstream 100 bases:

>100_bases
GTGTTCTTCGTGTCCTTCGTGGATCATCCCTTTGCGCTTATTTTGCATAACTCAGCGAAATCGGCTAGCATAGAGTGCTG
ATTATCGTAGGAGTGTGGGT

Downstream 100 bases:

>100_bases
CCTTAATCATTGACAAAACTAGCAAACTAAGCCCCTCAGACCGTGCTATACTAGCAATGGTATCAGCACATTGCACAGCG
TATTAATTTGGCTGAATTCC

Product: ribosomal small subunit Rsm22

Products: NA

Alternate protein names: Methyltransferase Type; SAM Methyltransferase; Methyltransferase; rRNA Methylase; rRNA Methylase-Like Protein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLPPALRVALERELTGTDQRRLAAAASGLSERYRAGHSRTTAPFVQNAADVLAYAATRMPATLGAIKAACAEIAQRQPNF
QPQTQLDLGAGTGAATWAASQTWSSLLQHQLIERENTMLQLGQRLMQAGPTSLQQARWQQANLPNANALGNYDLVTIGYV
LGELNATQRQQLLLQAWQASSGVLLIVEPGTPRGFELILAARTFLLEQQAHLIAPCPHQQTCPMQANDWCHFATRIERTR
FHRSLKAAELGYEDEKSSYIAVSRQSSQLAQARVIRHPSQQPQRIQLQLCTPQGLRSITINKRDAQWKQARKAEWGDSFE
LNPTQD

Sequences:

>Translated_326_residues
MLPPALRVALERELTGTDQRRLAAAASGLSERYRAGHSRTTAPFVQNAADVLAYAATRMPATLGAIKAACAEIAQRQPNF
QPQTQLDLGAGTGAATWAASQTWSSLLQHQLIERENTMLQLGQRLMQAGPTSLQQARWQQANLPNANALGNYDLVTIGYV
LGELNATQRQQLLLQAWQASSGVLLIVEPGTPRGFELILAARTFLLEQQAHLIAPCPHQQTCPMQANDWCHFATRIERTR
FHRSLKAAELGYEDEKSSYIAVSRQSSQLAQARVIRHPSQQPQRIQLQLCTPQGLRSITINKRDAQWKQARKAEWGDSFE
LNPTQD
>Mature_326_residues
MLPPALRVALERELTGTDQRRLAAAASGLSERYRAGHSRTTAPFVQNAADVLAYAATRMPATLGAIKAACAEIAQRQPNF
QPQTQLDLGAGTGAATWAASQTWSSLLQHQLIERENTMLQLGQRLMQAGPTSLQQARWQQANLPNANALGNYDLVTIGYV
LGELNATQRQQLLLQAWQASSGVLLIVEPGTPRGFELILAARTFLLEQQAHLIAPCPHQQTCPMQANDWCHFATRIERTR
FHRSLKAAELGYEDEKSSYIAVSRQSSQLAQARVIRHPSQQPQRIQLQLCTPQGLRSITINKRDAQWKQARKAEWGDSFE
LNPTQD

Specific function: Unknown

COG id: COG5459

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI12232389, Length=286, Percent_Identity=29.3706293706294, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI71999135, Length=292, Percent_Identity=28.0821917808219, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17507049, Length=351, Percent_Identity=22.7920227920228, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19921026, Length=183, Percent_Identity=36.6120218579235, Blast_Score=120, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36162; Mature: 36162

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPALRVALERELTGTDQRRLAAAASGLSERYRAGHSRTTAPFVQNAADVLAYAATRMP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
ATLGAIKAACAEIAQRQPNFQPQTQLDLGAGTGAATWAASQTWSSLLQHQLIERENTMLQ
HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQRLMQAGPTSLQQARWQQANLPNANALGNYDLVTIGYVLGELNATQRQQLLLQAWQAS
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
SGVLLIVEPGTPRGFELILAARTFLLEQQAHLIAPCPHQQTCPMQANDWCHFATRIERTR
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FHRSLKAAELGYEDEKSSYIAVSRQSSQLAQARVIRHPSQQPQRIQLQLCTPQGLRSITI
HHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE
NKRDAQWKQARKAEWGDSFELNPTQD
CCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPPALRVALERELTGTDQRRLAAAASGLSERYRAGHSRTTAPFVQNAADVLAYAATRMP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
ATLGAIKAACAEIAQRQPNFQPQTQLDLGAGTGAATWAASQTWSSLLQHQLIERENTMLQ
HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQRLMQAGPTSLQQARWQQANLPNANALGNYDLVTIGYVLGELNATQRQQLLLQAWQAS
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
SGVLLIVEPGTPRGFELILAARTFLLEQQAHLIAPCPHQQTCPMQANDWCHFATRIERTR
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FHRSLKAAELGYEDEKSSYIAVSRQSSQLAQARVIRHPSQQPQRIQLQLCTPQGLRSITI
HHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE
NKRDAQWKQARKAEWGDSFELNPTQD
CCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA