| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899170
Identifier: 159899170
GI number: 159899170
Start: 3401803
End: 3402489
Strand: Direct
Name: 159899170
Synonym: Haur_2651
Alternate gene names: NA
Gene position: 3401803-3402489 (Clockwise)
Preceding gene: 159899169
Following gene: 159899171
Centisome position: 53.6
GC content: 50.51
Gene sequence:
>687_bases ATGCGCTGGTGGAAAAAACTTGGCTTATTGGTGGTAGCAATGGCCTTGGTGGCCTGTGGCAACGCCGATGTCGATGCAGC AAAAGTGGCGAGCGAAGGTGCAACCGCCTTTGAAAGCGTCAACAATTTTCACTTTAAACTAACGGTCAGCGAAGGCGAAG CCGCGCCTTTGGGCGATATTATCATCATCGATGCTGATGGCGATAGCATTCGCCCTGATAAAATTCAAGCTAAAATCAAG GCCAAATTGGCAGGTGCACCAATCGCCGTCAATATCAACGGCATCATCATCGGAGCCGATGCCTGGATCACGCCGAATCC GTTCAACCCAACCGCCTTCGAAAAGTTGGAAGATACTGGTGGGCTTGAAACATTTTCGCCAGCCAAGGGTATTAGTGATG TGCTGCGCGGCCTGAAAACCCCAACGTTTGTCGAAGAGGCAGAAATCGACGGCACGGCAACCTATCATATCAGCGGCGAA GTTGATGCTCAAAGCGTCTCAGCGCTGACTGGTGGAGTCGCCGAGGCTGGTACAATTAAGCTCGATCTGTGGATTGGCAA AGACGACAAATTATTACGTCAATTGGTTGCGGTTGGCCGCTTGGTCAGCACCGAAAAAGAAACCATCAAGCGCACCTTGA TTGTTTCGAAATTCAACCAAACGCTCACAATCGAGCCACCACAATAG
Upstream 100 bases:
>100_bases TTTGGAGGGTCAAGGGCGTTTGCAGCGCGAACAACGGGCTAGACAGATTATCTTTCTTGATCAACACTAACGCCGATTCG CAACGTTTTTTGGAGGGTGT
Downstream 100 bases:
>100_bases TTTTCCGTAGGCTGGTTCGTTATGTCGAACCACGATGCTATGGATAGACCAAACACTGTAATCGCGAGGTATCCAAACAT GCTTGATCAACCATTAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ
Sequences:
>Translated_228_residues MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ >Mature_228_residues MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24180; Mature: 24180
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDI CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCE IIIDADGDSIRPDKIQAKIKAKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTG EEEECCCCCCCCHHHHHEEEEEECCCCEEEEECEEEECCCCEECCCCCCCHHHHHHHHCC GLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGEVDAQSVSALTGGVAEAGTIK CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEE LDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ EEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEECCCC >Mature Secondary Structure MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDI CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCE IIIDADGDSIRPDKIQAKIKAKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTG EEEECCCCCCCCHHHHHEEEEEECCCCEEEEECEEEECCCCEECCCCCCCHHHHHHHHCC GLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGEVDAQSVSALTGGVAEAGTIK CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEE LDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ EEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA