Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899171

Identifier: 159899171

GI number: 159899171

Start: 3402568

End: 3403059

Strand: Direct

Name: 159899171

Synonym: Haur_2652

Alternate gene names: NA

Gene position: 3402568-3403059 (Clockwise)

Preceding gene: 159899170

Following gene: 159899172

Centisome position: 53.61

GC content: 47.97

Gene sequence:

>492_bases
ATGCTTGATCAACCATTAAACGATATATTTACAGGGTGGGCTGCTATGACTGAACACAATAGCGATCTAGTGGCTGATCG
TTTTGGCATGCCACGCGCTGAACTCGACGAATTAGTCCATGGCTCGGTGGCACATTTGGCACAAACCCATTACTATCATT
ATTTAGCACGGCCAAAGCCTCAGTTTGATGATGATAGCGACGAAAACACCGCTGCCCAAAGCAAACCCCGCCATGTCGTG
CTGTTTCGCACGCCCGATGATGCACTATCGTTCGCCCAACGTATTCGCATTGGCGAAACACCACGGGTACGCCAAATTAG
TCGTGAGAATATGATTTGGCATATGCTCAACGATGAAGCGATTGTGCGGGTGATTTTCTTTGAGCAACCACTCGAAGAAT
TGCCAACTGGCCTAAATTTGCAAACTTTGGCCGATTTGCCTGGCGCAATTGCAATCGAACGCAACGATGTTTTGACCTCG
CGCCAAATTTGA

Upstream 100 bases:

>100_bases
CACAATCGAGCCACCACAATAGTTTTCCGTAGGCTGGTTCGTTATGTCGAACCACGATGCTATGGATAGACCAAACACTG
TAATCGCGAGGTATCCAAAC

Downstream 100 bases:

>100_bases
CCCTTACCTATCTGGGTGTTAGAATCCCGATAGGCGGAATATTAACTAGTAATGCTGATACCAAGAGCTACGATAAATTC
GTAGCTCTTTATCTATGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLDQPLNDIFTGWAAMTEHNSDLVADRFGMPRAELDELVHGSVAHLAQTHYYHYLARPKPQFDDDSDENTAAQSKPRHVV
LFRTPDDALSFAQRIRIGETPRVRQISRENMIWHMLNDEAIVRVIFFEQPLEELPTGLNLQTLADLPGAIAIERNDVLTS
RQI

Sequences:

>Translated_163_residues
MLDQPLNDIFTGWAAMTEHNSDLVADRFGMPRAELDELVHGSVAHLAQTHYYHYLARPKPQFDDDSDENTAAQSKPRHVV
LFRTPDDALSFAQRIRIGETPRVRQISRENMIWHMLNDEAIVRVIFFEQPLEELPTGLNLQTLADLPGAIAIERNDVLTS
RQI
>Mature_163_residues
MLDQPLNDIFTGWAAMTEHNSDLVADRFGMPRAELDELVHGSVAHLAQTHYYHYLARPKPQFDDDSDENTAAQSKPRHVV
LFRTPDDALSFAQRIRIGETPRVRQISRENMIWHMLNDEAIVRVIFFEQPLEELPTGLNLQTLADLPGAIAIERNDVLTS
RQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18643; Mature: 18643

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDQPLNDIFTGWAAMTEHNSDLVADRFGMPRAELDELVHGSVAHLAQTHYYHYLARPKP
CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
QFDDDSDENTAAQSKPRHVVLFRTPDDALSFAQRIRIGETPRVRQISRENMIWHMLNDEA
CCCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCEEEEEECCCC
IVRVIFFEQPLEELPTGLNLQTLADLPGAIAIERNDVLTSRQI
EEEEEEECCCHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MLDQPLNDIFTGWAAMTEHNSDLVADRFGMPRAELDELVHGSVAHLAQTHYYHYLARPKP
CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
QFDDDSDENTAAQSKPRHVVLFRTPDDALSFAQRIRIGETPRVRQISRENMIWHMLNDEA
CCCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCEEEEEECCCC
IVRVIFFEQPLEELPTGLNLQTLADLPGAIAIERNDVLTSRQI
EEEEEEECCCHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA