Click here to switch to the map view.

The map label for this gene is 159899123

Identifier: 159899123

GI number: 159899123

Start: 3344639

End: 3345202

Strand: Reverse

Name: 159899123

Synonym: Haur_2604

Alternate gene names: NA

Gene position: 3345202-3344639 (Counterclockwise)

Preceding gene: 159899126

Following gene: 159899122

Centisome position: 52.71

GC content: 42.55

Gene sequence:

>564_bases
ATGCATTATCAAAATATGTTATGTATTGGCGATAGCCAAACCTTTGGTGCTCGTTCGTATGGCTGTTATCCCTTACATTT
AGCCCAAATGTTGACTCAGCGCACACCCTATCAATGGCGCACAATTAATCGCAGTGTCAATGGCTATACTGCGCGTAACT
TGTGGTTTAAGCTCAACGAAGAAATTGATACGATTAGTGATACCTATCAATCGTGTGTGTTGATTGGTACAAACGATGTC
GGCAATAATACCCCGATCGATCTTTTTGAAGAATATTATCGCCAAATTATTCGCACCCTCTTGATTAAAGGCCATAAAGC
AGTTTTTTGTGGCGAGATTCCGCCAATCTATGCTGATGGACATATTTTCTTCACCAAAGAAACCCTTGAACGCCGCAAAC
AATACAATGCGGTGGTTGGCAAAGTGGTTGCCGAATTTAGCAAGGCCATTTGGGTTTCGATGGTTGGTTTAAATCGCGAT
TGTTACGTTGACCCAGTGCACTTCAACGAAGATGGCAATCGGCGCGTCGCCGAATCATTCTGTGAGGTCATTGTAAATTT
ATGA

Upstream 100 bases:

>100_bases
TGTGAGTTGAGGGAGGTGGGAATGATCAGATTAATCTTGCTCGGATTGCGTGGAATATTCGCTGTCGGGATTATTTTTGA
TTATTAGGTTGATTGTTATT

Downstream 100 bases:

>100_bases
ACATTGGGATTGTGCTTGGCACGCGGCCTGAGGTGATGAAAAATTATGCGATTGTGCAGGCATTACGCGCGGCTGATTTG
CCGTTTGTGGTGCTTCACAC

Product: GDSL family lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MHYQNMLCIGDSQTFGARSYGCYPLHLAQMLTQRTPYQWRTINRSVNGYTARNLWFKLNEEIDTISDTYQSCVLIGTNDV
GNNTPIDLFEEYYRQIIRTLLIKGHKAVFCGEIPPIYADGHIFFTKETLERRKQYNAVVGKVVAEFSKAIWVSMVGLNRD
CYVDPVHFNEDGNRRVAESFCEVIVNL

Sequences:

>Translated_187_residues
MHYQNMLCIGDSQTFGARSYGCYPLHLAQMLTQRTPYQWRTINRSVNGYTARNLWFKLNEEIDTISDTYQSCVLIGTNDV
GNNTPIDLFEEYYRQIIRTLLIKGHKAVFCGEIPPIYADGHIFFTKETLERRKQYNAVVGKVVAEFSKAIWVSMVGLNRD
CYVDPVHFNEDGNRRVAESFCEVIVNL
>Mature_187_residues
MHYQNMLCIGDSQTFGARSYGCYPLHLAQMLTQRTPYQWRTINRSVNGYTARNLWFKLNEEIDTISDTYQSCVLIGTNDV
GNNTPIDLFEEYYRQIIRTLLIKGHKAVFCGEIPPIYADGHIFFTKETLERRKQYNAVVGKVVAEFSKAIWVSMVGLNRD
CYVDPVHFNEDGNRRVAESFCEVIVNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21621; Mature: 21621

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYQNMLCIGDSQTFGARSYGCYPLHLAQMLTQRTPYQWRTINRSVNGYTARNLWFKLNE
CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHEEEEECC
EIDTISDTYQSCVLIGTNDVGNNTPIDLFEEYYRQIIRTLLIKGHKAVFCGEIPPIYADG
HHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECC
HIFFTKETLERRKQYNAVVGKVVAEFSKAIWVSMVGLNRDCYVDPVHFNEDGNRRVAESF
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCCHHHHHHH
CEVIVNL
HHHHHCC
>Mature Secondary Structure
MHYQNMLCIGDSQTFGARSYGCYPLHLAQMLTQRTPYQWRTINRSVNGYTARNLWFKLNE
CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHEEEEECC
EIDTISDTYQSCVLIGTNDVGNNTPIDLFEEYYRQIIRTLLIKGHKAVFCGEIPPIYADG
HHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECC
HIFFTKETLERRKQYNAVVGKVVAEFSKAIWVSMVGLNRDCYVDPVHFNEDGNRRVAESF
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCCHHHHHHH
CEVIVNL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA