Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yfcE [C]

Identifier: 159899126

GI number: 159899126

Start: 3347593

End: 3348099

Strand: Reverse

Name: yfcE [C]

Synonym: Haur_2607

Alternate gene names: 159899126

Gene position: 3348099-3347593 (Counterclockwise)

Preceding gene: 159899129

Following gene: 159899123

Centisome position: 52.75

GC content: 49.11

Gene sequence:

>507_bases
ATGCAACGGATTTGTATTGTTTCAGATACCCATGGCAAGTTTGACCCACGGATCGAGCAGCTTTTTATAGGGGCAGCAGG
GATTGTGCACGCAGGCGATATCGGACGAGCACAGCCACCAATCATCGAACGCTTGGGGGCGATTGCTCCGGTTACGGCGG
TGACAGGCAACGTCGATTGGAATACTGCCCTCGATATTTACCCAATTAATACAACGCTTGAAGTGCAAGGCATTCGGATT
ATGATCCAGCATATTGGCGATATTCCCAAACGCTGGTATCGCCAATTGCCGCAACCCTTGCCGCATGTGGTGATTTGTGG
CCATAGCCATATCGCTTTAATCGAAGAATATCAAGGGGTCTTGTTTATCAATCCTGGTTCAGCTTCGCAGCCACGCGGCC
AGCTCGGCGAGCCGACTGTGGCTTTCTTAGATATTCAGGAAAACGGTGAGTTTCACGCTGAAATTATTCCGCTCAAAATG
GCCGAATTTATCAAACATGCCGATTAA

Upstream 100 bases:

>100_bases
ATCAAATGACAGATGTCAATATCTGTCATTGCATTTTAGTAAGCTATTTTGAGCTATGCTATGATAATTACGATTCTTGT
GGATTGTGGTGAGGCACGCG

Downstream 100 bases:

>100_bases
ACAGCAATCCCCTCACCAAATCAATGGCGAGGGGATTTGCTTTACCAAGCGAGCTTATTCGTGACGCAATGCCTTGATTG
GGTCAAGGCGGGCGGCACGT

Product: phosphodiesterase

Products: NA

Alternate protein names: Phosphoesterase; Phosphoesterase Subfamily; Metallophosphoesterase Superfamily Protein; Calcineurin-Like Phosphoesterase; Metallophosphoesterase; Phosphoesterase YfcE; Phosphodiesterase Family Protein; Phosphoesterase Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI
MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM
AEFIKHAD

Sequences:

>Translated_168_residues
MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI
MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM
AEFIKHAD
>Mature_168_residues
MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI
MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM
AEFIKHAD

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18536; Mature: 18536

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDW
CCEEEEEECCCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHCCCCCEEEEECCCCC
NTALDIYPINTTLEVQGIRIMIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGV
CCEEEEEECCCEEEECHHHHEEHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCCE
LFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKMAEFIKHAD
EEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDW
CCEEEEEECCCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHCCCCCEEEEECCCCC
NTALDIYPINTTLEVQGIRIMIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGV
CCEEEEEECCCEEEECHHHHEEHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCCE
LFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKMAEFIKHAD
EEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA