Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899119

Identifier: 159899119

GI number: 159899119

Start: 3337357

End: 3339750

Strand: Direct

Name: 159899119

Synonym: Haur_2600

Alternate gene names: NA

Gene position: 3337357-3339750 (Clockwise)

Preceding gene: 159899118

Following gene: 159899120

Centisome position: 52.59

GC content: 47.99

Gene sequence:

>2394_bases
ATGTCGAGAAGTTCAAAATTAATCAGCATCGTTACCCTGTTTTTAATTATGTTAAGTGCTATCACCAAGCCAAGCGCTCC
GGTGGCAGCCGTGGAGCCGCAAATTCCAAGCAGCCCTGGCACATGGAGCCAAGATTTTGGCTTATATATAAAAACTGCCG
CTAACAGCTATACCCCGTTGCGCCCAATTGAATGGAATGGCACGCTGTATGCAATTTTGAATGGACATCGCAACTTTGAG
TCGGGGGTTGGTTATTGGAATGACCAACAATGGCTGAAAATAGATGGCCTGAACGGTCAAGTTGATGTGCTGACGGTGCA
TCAAAATCGTTTGTATGTGGCTGGGCGCTTTACCATCGCTGGTAAGAACCTTAACCTTGCCTATTGGGATGGCAACTTGT
GGACGGCTATGCCCATGCATGTTGTTCAAGATGGCCCGTTTTTGTTAGCAAGTTATGCCAATCAACTGTATCTTGGGAGC
GAAGCCCTGTTGATCGATGATCAAGCCTATGGCAGCTTAGCCCGTTGGGATGGTGAACAGTGGCATGCGGCGGCAGCTGG
CATTGAAGGTGTTGTGTTTACCATGCTTTCACGCCCCGATGGCCTCTATCTCGGCGGCTCCTTTTTATATAATGGTCAAG
CAACTAGTTTACTGTATTGGAATGGTTCCCAATGGCAAACTGTTGGTGGTGGGGTTTATGGCCATGTGGTTGATTTGAAA
TGGGCCAATAACCAACTCTACATCAGTGGGAATTTCACCTCAACGCTTGTGCCAAGTATGCGCAATGTCGCCGCCTGGAA
TGGCACGAACTGGAATACCTTCGACACGGGTTTGACTGGCTGGGTTCATAATGTAACCGTTATGGATGGTGAACTCTATG
CACTCCATCGGCCAACTGATAGTTCAGGCTATGAGCATCTGCATTGGGATGGGAGTGAATGGATCTTCTTAGCTGATCTT
GGTTCAATGGATTATTCTTGGCTATTTTCCCCAAGAGCTGTATTTGTACAGTATAAGCAAGAGTTATTGCTGGTTGGTGA
AATTAGCTATTATAGTAGTGCCGTTGAACCAACCAGCCAAGGTGATTCAACCTTACGTTGGAATGGCACAGAGTGGGAAC
CAATGAATTCCCATGGCTTATTGACCCGAATGGCAACTGCGATTGCCACAGTTGATGAAAATCTTTTGGTGGCATCGAGT
AACTTTTACTGGAGCCAAGGTGTTGCTTCGCTAGCCCAATTTGGCAGCAATCAGCATTGGCAGAAGCTCGTTGATCGGCG
ATCTACTTCAGACCCGGTGCAAGCACTCGAAGCCTTTCAACAAAGCCATTTTATGGTTAGTTACTATACGCTGTACGAAG
CTGCTAGCACCACCTGGAACCAAATTGGCGCGTTCCGTGTGGTTCGTGCAATTGCCCAATCCAATAACAAATTGTATGTT
GCTGGTGATTTTGAGCAATTCAATGGGGTCACGGCGCATAATTTGGTGACTTGGGATGGCACGCAATGGCAAGCCTTAAA
TGCGCCAGCCTCATTCGATCAAGTGGTGCTAATTGAGGCCCATGGCAATCATGTGTATATCAGCGATGGCTTTCAATTGG
CTCGCTGGGATGGCACGCAGTGGACAACCCTCGCCACCAATGTGGTCAATATTGGTTCAATTGAAGCAACTACCAATGGG
GTCTATATCGCTGGCACCTTTAGCAGTGTTGGCGGCGTGACAGCCCCCAAAATCGCCTATTGGAATGGCACGGCTTGGTC
GGGCTTGAGTGGGGTGATTAGTGGTTCAATTCTTGATCTGGAAATGGGAGCCGATGGCCTATATGTGGCAGGCAACTTTT
TCGGTTTGAACAATGGCATCGTTAGCCCAGGGATTCTGCGCTGGGATGGGTCGGCATGGCATGGAGTTGGCGGTGGTGTT
CAGACGTATCGATCGTTTGGTATAGTGAACAATGGGACGGTTCAGCGCTTAGCCGCCACTCCGACCCGTATGTTTATGTA
TGGTGACTTCAATCGGGTTGGCAACCAATATGAGTCGTATACTTTGGCCGTGTGGGAATATGGTGACGAACCATTGATCA
AAGCCAAACCTGATTATGCGTTTACCAATCGCCCTCAAGCGGTTACGGTCAATGTTTTAGCCAATGATTGGAGCTACCAT
CCATCTCAATTGCAACTGGTGAATCTCACAGCGCCAAGCCATGGCACGGCTGTGATTAGCGGTAATTCGGTGGTCTACAC
ACCGTATCCTCAATTTACCGGGATTGATACTCTGACCTATACCGTGCGCGATCCAATCAATGCCGTAACAACCACAGCTC
AATTACGGCTCTATGTTTGGAATACCCCCAATGTTGTTTTGAATGAGCTGTATTTACCAGCAGTTATCCGATAA

Upstream 100 bases:

>100_bases
TATCACTTATTCTTGCCCTATACCATCAAATAAACGATTAAATCAGCGGTAATCGCGCATCGATTGCCGCTCCCCAATCT
AGCTTTGAGAGGAAGTTCCC

Downstream 100 bases:

>100_bases
TATTGATCTAGGTGTTGGCCTAAAATGCTAGCACCTGTCCATAGTTAGTTGAGGGCAAGAGAAAACATTATGCGAAAATT
ATTTCGGCGCTTAGGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 797; Mature: 796

Protein sequence:

>797_residues
MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFE
SGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGS
EALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK
WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADL
GSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASS
NFYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV
AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNG
VYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGV
QTYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH
PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR

Sequences:

>Translated_797_residues
MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFE
SGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGS
EALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK
WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADL
GSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASS
NFYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV
AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNG
VYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGV
QTYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH
PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR
>Mature_796_residues
SRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFES
GVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSE
ALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLKW
ANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADLG
SMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSN
FYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYVA
GDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNGV
YIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQ
TYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYHP
SQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87894; Mature: 87763

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPL
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
RPIEWNGTLYAILNGHRNFESGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIA
CEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEEEE
GKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSEALLIDDQAYGSLARWDGEQ
CCCEEEEEECCCEEEECCEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCHHHCCCCH
WHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK
HHHHHCCCCEEEEEEECCCCCEEECCEEEECCCEEEEEEECCCEEEEECCCEEEEEEEEE
WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTD
ECCCEEEEECCCHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCC
SSGYEHLHWDGSEWIFLADLGSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQ
CCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEEEEEEHHHHCCCCCCCC
GDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSNFYWSQGVASLAQFGSNQHW
CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHH
QKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV
HHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQ
EECHHHHCCEEEHEEEEECCCCEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCE
WTTLATNVVNIGSIEATTNGVYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDL
EEEEEECEEEECEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEE
EMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQTYRSFGIVNNGTVQRLAAT
EECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
PTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH
CEEEEEEECHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCC
PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVW
CCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEE
NTPNVVLNELYLPAVIR
CCCCCEEHHCCCCEECC
>Mature Secondary Structure 
SRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPL
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
RPIEWNGTLYAILNGHRNFESGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIA
CEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEEEE
GKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSEALLIDDQAYGSLARWDGEQ
CCCEEEEEECCCEEEECCEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCHHHCCCCH
WHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK
HHHHHCCCCEEEEEEECCCCCEEECCEEEECCCEEEEEEECCCEEEEECCCEEEEEEEEE
WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTD
ECCCEEEEECCCHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCC
SSGYEHLHWDGSEWIFLADLGSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQ
CCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEEEEEEHHHHCCCCCCCC
GDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSNFYWSQGVASLAQFGSNQHW
CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHH
QKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV
HHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQ
EECHHHHCCEEEHEEEEECCCCEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCE
WTTLATNVVNIGSIEATTNGVYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDL
EEEEEECEEEECEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEE
EMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQTYRSFGIVNNGTVQRLAAT
EECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
PTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH
CEEEEEEECHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCC
PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVW
CCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEE
NTPNVVLNELYLPAVIR
CCCCCEEHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA