| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899120
Identifier: 159899120
GI number: 159899120
Start: 3339820
End: 3341934
Strand: Direct
Name: 159899120
Synonym: Haur_2601
Alternate gene names: NA
Gene position: 3339820-3341934 (Clockwise)
Preceding gene: 159899119
Following gene: 159899124
Centisome position: 52.62
GC content: 46.76
Gene sequence:
>2115_bases ATGCGAAAATTATTTCGGCGCTTAGGGCGCATTGGCGCAATCATTGGTTTATTGAGCTGCGGATTGAGCCTAGCGATTGA TCCAACTCAAGCTAGGCAACCAAGTGAAACTTCAAATGCCAATTCGTGGAGCAATGAATTTGCTGGGTTTGGTATCAACG CCGACACGCGCGGATTAAGCCATCCATTGGTTTGGAATAATACCCTTTATGCAGCAGCGATTGATGGTAGTTCAATGACT GATCTTACGGGCGTTGTCTATTGGGATGGTCGGCAATGGTTAAAGCTCGGAGCCTTGAATGGCTATGTTGAAGCCCTGAC GATTCACCAAGATAAGCTGTACGCTGGTGGCGTATTGAAACTTAATGGTCAAGATGTTGATCTCGCTTATTGGGATGGCA CAACGTGGACTGGTTTAGCCACCGTTCTCACGAACAATTACCTGATGAGCTTGGCGAGTTACCAAAATGAGCTTTATTTG ACCAGTACGCCATTGACAATCGATGGTCAAGCCTACCAAAATATTGCCCGCTGGAATGGTAGCGAATGGAATCCAGTCGG TACTGGAGTTGATGGAATTATTTTGAATGTCGTCAGTGGTGCTGATGGTATCTATGTCAGTGGCTCGCTTGAGCCGATCA ATTCTCAAAATCAAGGTGGAATTGTGCGTTGGGATGGGAGCCAATGGCACGATGTTGGTGGTAGAATAACTGGCTATATC ATGGATCTACAGCTAGTTGATAATCAGGTCATTATCGGCGGGGCATTTACCTCAACCACCAACATCCAAATGCATAATAT TGCTGCTTGGAATGGCACAACCTGGAATACCTTTGGCAATGGGATTAACAATCCAATTGAAAGTGTGTTGCTTCGCGATC AAGGCTTGTTTGCTTTAGGTAAGCCAATTGGAATCGATGTGCCGTTATATGTTTGGAATGGCTCGGATTGGGCGATTGCA GCCCAAGCAAGCTATAAAAATTATGAGTGGCTTGAATTTCCCAAATATTCGTTGGTTGAATTTGACAATGACATGTATGC CTTGGGTGATTTATACATCTATGATCAATATTATGCGCTGAATCGTCTGGTATTTCGCGATGACCATTGGGAGTCGATGA CCCCCAATGGGTTTGATAGTGCTCCACTTAACTTGAGTAACGTTGGTGAAACGATCTATGGGTATGTGCGAACCCACGCA ACTTGGGGCAGTGGGCGAGGTGCTCTGATTCGTTCTGATGCTGCGACTGGATGGCAAACGTTAATTGCTGAGCCAGTTGC GAGTGTTATGAGCAATGCCGAACAACTAGAAGTAATCAGTGATACGATCTTTTTAATTCAAGCCAATCGGTTGTATCAAA CTACCCAAGTTTCAACAACCTGGCTTAGCATTACGGATCAAACGGTTTTTGGCATGGCCCGTGACCAAGGCAAACTCTAT GTAGCAGGTGGTTTTAGCCAATTTGCTGGGGTCAATACCAATAATTTGGCAGTTTGGAATAATGGCCAATGGCAAGCCTT GCATGCTCCAGCCACGTTTAATCAAGTAACGGTAGTTGAGGCCTTGAATGGCGTAGTCTATATCAGCGATGGCGCACAGC TAGCCCGTTGGGATGGGACGCAATGGCAAACGCTGGCTACTGGTGTGAATAGCATTCGCCAGCTTGAGGCAAGTGCTGAC GGCGTGTATGTTACTGGCACATTCAGTAGTATTGCTGGAGTACCCGCCTACCAAATTGCCTATTGGAATGGCTCACACTG GTCGGCCTTGAGTGGCATGATTGATGGCCCAATCAATGATCTTGAAATGGGTGTTGATGGCTTGTACGTGGCTGGTTCGT TCAATGGCGTGGCTGGTGGGGTGGTTAGCCCAGGTATTTTGCGCTGGAATGGAATTTGGAACAGTGTTGGAGGTGGAGTA CAACACCGTGATCAATATGCAAGTGGGTTTACCGTTACTAGTTTGGTTGCTACCCCAACGCGCATGTATTTGAGCGGTGT ATTCGATAGCGTTGGTAATACCTACGAATCATCGAGGATTGCTGCTTGGACATATGGCGAGCCAGGCTGGGTTGCGCCAA GCTATGCAGTCTATGCACCGTTGACGGTTCGTTAA
Upstream 100 bases:
>100_bases TGAGCTGTATTTACCAGCAGTTATCCGATAATATTGATCTAGGTGTTGGCCTAAAATGCTAGCACCTGTCCATAGTTAGT TGAGGGCAAGAGAAAACATT
Downstream 100 bases:
>100_bases ATTTGCTGAATGGAAAGCCCTAGGCCGCTCGTTATTGAGCGGCCTAGGGCTTTTTTGTTTAGATTGAAAGAATTTTGAGG AAGTTGGTTGTGCCACGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MRKLFRRLGRIGAIIGLLSCGLSLAIDPTQARQPSETSNANSWSNEFAGFGINADTRGLSHPLVWNNTLYAAAIDGSSMT DLTGVVYWDGRQWLKLGALNGYVEALTIHQDKLYAGGVLKLNGQDVDLAYWDGTTWTGLATVLTNNYLMSLASYQNELYL TSTPLTIDGQAYQNIARWNGSEWNPVGTGVDGIILNVVSGADGIYVSGSLEPINSQNQGGIVRWDGSQWHDVGGRITGYI MDLQLVDNQVIIGGAFTSTTNIQMHNIAAWNGTTWNTFGNGINNPIESVLLRDQGLFALGKPIGIDVPLYVWNGSDWAIA AQASYKNYEWLEFPKYSLVEFDNDMYALGDLYIYDQYYALNRLVFRDDHWESMTPNGFDSAPLNLSNVGETIYGYVRTHA TWGSGRGALIRSDAATGWQTLIAEPVASVMSNAEQLEVISDTIFLIQANRLYQTTQVSTTWLSITDQTVFGMARDQGKLY VAGGFSQFAGVNTNNLAVWNNGQWQALHAPATFNQVTVVEALNGVVYISDGAQLARWDGTQWQTLATGVNSIRQLEASAD GVYVTGTFSSIAGVPAYQIAYWNGSHWSALSGMIDGPINDLEMGVDGLYVAGSFNGVAGGVVSPGILRWNGIWNSVGGGV QHRDQYASGFTVTSLVATPTRMYLSGVFDSVGNTYESSRIAAWTYGEPGWVAPSYAVYAPLTVR
Sequences:
>Translated_704_residues MRKLFRRLGRIGAIIGLLSCGLSLAIDPTQARQPSETSNANSWSNEFAGFGINADTRGLSHPLVWNNTLYAAAIDGSSMT DLTGVVYWDGRQWLKLGALNGYVEALTIHQDKLYAGGVLKLNGQDVDLAYWDGTTWTGLATVLTNNYLMSLASYQNELYL TSTPLTIDGQAYQNIARWNGSEWNPVGTGVDGIILNVVSGADGIYVSGSLEPINSQNQGGIVRWDGSQWHDVGGRITGYI MDLQLVDNQVIIGGAFTSTTNIQMHNIAAWNGTTWNTFGNGINNPIESVLLRDQGLFALGKPIGIDVPLYVWNGSDWAIA AQASYKNYEWLEFPKYSLVEFDNDMYALGDLYIYDQYYALNRLVFRDDHWESMTPNGFDSAPLNLSNVGETIYGYVRTHA TWGSGRGALIRSDAATGWQTLIAEPVASVMSNAEQLEVISDTIFLIQANRLYQTTQVSTTWLSITDQTVFGMARDQGKLY VAGGFSQFAGVNTNNLAVWNNGQWQALHAPATFNQVTVVEALNGVVYISDGAQLARWDGTQWQTLATGVNSIRQLEASAD GVYVTGTFSSIAGVPAYQIAYWNGSHWSALSGMIDGPINDLEMGVDGLYVAGSFNGVAGGVVSPGILRWNGIWNSVGGGV QHRDQYASGFTVTSLVATPTRMYLSGVFDSVGNTYESSRIAAWTYGEPGWVAPSYAVYAPLTVR >Mature_704_residues MRKLFRRLGRIGAIIGLLSCGLSLAIDPTQARQPSETSNANSWSNEFAGFGINADTRGLSHPLVWNNTLYAAAIDGSSMT DLTGVVYWDGRQWLKLGALNGYVEALTIHQDKLYAGGVLKLNGQDVDLAYWDGTTWTGLATVLTNNYLMSLASYQNELYL TSTPLTIDGQAYQNIARWNGSEWNPVGTGVDGIILNVVSGADGIYVSGSLEPINSQNQGGIVRWDGSQWHDVGGRITGYI MDLQLVDNQVIIGGAFTSTTNIQMHNIAAWNGTTWNTFGNGINNPIESVLLRDQGLFALGKPIGIDVPLYVWNGSDWAIA AQASYKNYEWLEFPKYSLVEFDNDMYALGDLYIYDQYYALNRLVFRDDHWESMTPNGFDSAPLNLSNVGETIYGYVRTHA TWGSGRGALIRSDAATGWQTLIAEPVASVMSNAEQLEVISDTIFLIQANRLYQTTQVSTTWLSITDQTVFGMARDQGKLY VAGGFSQFAGVNTNNLAVWNNGQWQALHAPATFNQVTVVEALNGVVYISDGAQLARWDGTQWQTLATGVNSIRQLEASAD GVYVTGTFSSIAGVPAYQIAYWNGSHWSALSGMIDGPINDLEMGVDGLYVAGSFNGVAGGVVSPGILRWNGIWNSVGGGV QHRDQYASGFTVTSLVATPTRMYLSGVFDSVGNTYESSRIAAWTYGEPGWVAPSYAVYAPLTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76573; Mature: 76573
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLFRRLGRIGAIIGLLSCGLSLAIDPTQARQPSETSNANSWSNEFAGFGINADTRGLS CHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPLVWNNTLYAAAIDGSSMTDLTGVVYWDGRQWLKLGALNGYVEALTIHQDKLYAGGVLK CCEEECCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCEEECCEEE LNGQDVDLAYWDGTTWTGLATVLTNNYLMSLASYQNELYLTSTPLTIDGQAYQNIARWNG ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHCCC SEWNPVGTGVDGIILNVVSGADGIYVSGSLEPINSQNQGGIVRWDGSQWHDVGGRITGYI CCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEECCCCEEEEEE MDLQLVDNQVIIGGAFTSTTNIQMHNIAAWNGTTWNTFGNGINNPIESVLLRDQGLFALG EEEEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEC KPIGIDVPLYVWNGSDWAIAAQASYKNYEWLEFPKYSLVEFDNDMYALGDLYIYDQYYAL CCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCEEEEECCCEEEEEEEEEEECHHHH NRLVFRDDHWESMTPNGFDSAPLNLSNVGETIYGYVRTHATWGSGRGALIRSDAATGWQT CEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHEEEEEEEEECCCCCCEEEECCCCCCHHH LIAEPVASVMSNAEQLEVISDTIFLIQANRLYQTTQVSTTWLSITDQTVFGMARDQGKLY HHHHHHHHHHCCHHHEEHEEEEEEEEEECCEEEEEEEEEEEEEEECCEEEEEECCCCCEE VAGGFSQFAGVNTNNLAVWNNGQWQALHAPATFNQVTVVEALNGVVYISDGAQLARWDGT EEECHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEHHCCEEEEECCCEEEECCCC QWQTLATGVNSIRQLEASADGVYVTGTFSSIAGVPAYQIAYWNGSHWSALSGMIDGPIND CHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEEEECCCCHHHHCCCCCCCCCH LEMGVDGLYVAGSFNGVAGGVVSPGILRWNGIWNSVGGGVQHRDQYASGFTVTSLVATPT HHCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHCCCCEEEHHHHCCH RMYLSGVFDSVGNTYESSRIAAWTYGEPGWVAPSYAVYAPLTVR HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MRKLFRRLGRIGAIIGLLSCGLSLAIDPTQARQPSETSNANSWSNEFAGFGINADTRGLS CHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPLVWNNTLYAAAIDGSSMTDLTGVVYWDGRQWLKLGALNGYVEALTIHQDKLYAGGVLK CCEEECCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEECCCEEECCEEE LNGQDVDLAYWDGTTWTGLATVLTNNYLMSLASYQNELYLTSTPLTIDGQAYQNIARWNG ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCHHHHHHHHCCC SEWNPVGTGVDGIILNVVSGADGIYVSGSLEPINSQNQGGIVRWDGSQWHDVGGRITGYI CCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEECCCCEEEEEE MDLQLVDNQVIIGGAFTSTTNIQMHNIAAWNGTTWNTFGNGINNPIESVLLRDQGLFALG EEEEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEC KPIGIDVPLYVWNGSDWAIAAQASYKNYEWLEFPKYSLVEFDNDMYALGDLYIYDQYYAL CCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCEEEEECCCEEEEEEEEEEECHHHH NRLVFRDDHWESMTPNGFDSAPLNLSNVGETIYGYVRTHATWGSGRGALIRSDAATGWQT CEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHEEEEEEEEECCCCCCEEEECCCCCCHHH LIAEPVASVMSNAEQLEVISDTIFLIQANRLYQTTQVSTTWLSITDQTVFGMARDQGKLY HHHHHHHHHHCCHHHEEHEEEEEEEEEECCEEEEEEEEEEEEEEECCEEEEEECCCCCEE VAGGFSQFAGVNTNNLAVWNNGQWQALHAPATFNQVTVVEALNGVVYISDGAQLARWDGT EEECHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEHHCCEEEEECCCEEEECCCC QWQTLATGVNSIRQLEASADGVYVTGTFSSIAGVPAYQIAYWNGSHWSALSGMIDGPIND CHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEEEEEECCCCHHHHCCCCCCCCCH LEMGVDGLYVAGSFNGVAGGVVSPGILRWNGIWNSVGGGVQHRDQYASGFTVTSLVATPT HHCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHCCCCEEEHHHHCCH RMYLSGVFDSVGNTYESSRIAAWTYGEPGWVAPSYAVYAPLTVR HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA