| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is bfmBAA [H]
Identifier: 159899110
GI number: 159899110
Start: 3325464
End: 3326438
Strand: Direct
Name: bfmBAA [H]
Synonym: Haur_2591
Alternate gene names: 159899110
Gene position: 3325464-3326438 (Clockwise)
Preceding gene: 159899109
Following gene: 159899111
Centisome position: 52.4
GC content: 54.05
Gene sequence:
>975_bases ATGGAGCAAGAACGCGATCAAACGCGGTTGTTAGCGATGTATCACACGATGGTTTTGGCTCGTTCGCTTGATGAGCGAAT GTGGCAATTGAATCGTCAAGGCAAAGCCCCTTTTGTTATTTCCTGCCAAGGTCATGAGGCTGCTCAAGTAGGCGCAGCCT TTGCAATGCGCCCCAAACACGATTGGATTGTGCCCTACTATCGTGATTTAGCAATGATGTTGGCAATGGGAATGACCCCG CGCGAGGTGATGCTCGGCTTGTTGGCGAAAGCCGAAGATCCTAGCAGTGGTGGCCGCCAGATGCCCGCTCACTATAGCCA TCGTGCTTTGAATATTGTTTCGCACTCGTCGCCAACGGGCACCCAAGTGCCGCATGCCGTCGGTGTCGCTATGGGCGCAC AAATGCGCGGCGATGATATTGTGGTTTGGACGGCGTTTGGCGAAGGTACATCATCACAGGGCGATGTCCACGAGGCCATG AACTTGGCTGGGGTGATGAAATTACCAGTAATTTTCTTCTGCGAAAATAATGGCTACGCCATCTCCGTGCCGCAGCACAA GCAAATGGGCGTAGAAAACGTCTCGGATCGCGGCCCAGGCTACGGGTTTCCTGGGATCACGGTTGATGGCACCAATGTGC TTGAGGTTTACGAAGCTATGACCGCTGCGGTCGAACGCGCCCGCCGTGGCGACGGCCCAACCTTGATCGAGGCCAAATGT GTGCGTTTGACCGCCCACTCCTCTGATGATAATGACCGAACGTATCGCTCACCTGAAGATATCAAGGCCATGCGCACCCG CGACCCAATCGCGAGCTTCGAGCATTTCTTGCGCGATGAAGGCATGCTCGATGATGCCAAAGTTGCCGCAATTCGCGCCG AAATTAAAGAAATTGTCAATGATGCAACAGCCTATGCTGAAGCAGCACCCTTGCCCGACCCCAGCACCGTGCGCAAATAT GTGTTTGCCGAATAA
Upstream 100 bases:
>100_bases TTTCCTTGCTTGCCCTTGCCTCGGTCGCCATACCGGGGTTTTTAACTTAACAGGGTTCGACGGACGAACAAAGTAATCCT TCATATGAGGAGTTGCCTTC
Downstream 100 bases:
>100_bases CCGTGCTCGCAGGCAGTTTCGCTATTTATCATGTGCATAGAGGTATCAGGTGGCAGAATTAAATCTCTTAGAAGCGATCA ATCAAGCGCTCGACCAAGCT
Product: 3-methyl-2-oxobutanoate dehydrogenase
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MEQERDQTRLLAMYHTMVLARSLDERMWQLNRQGKAPFVISCQGHEAAQVGAAFAMRPKHDWIVPYYRDLAMMLAMGMTP REVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTGTQVPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAM NLAGVMKLPVIFFCENNGYAISVPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKC VRLTAHSSDDNDRTYRSPEDIKAMRTRDPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVNDATAYAEAAPLPDPSTVRKY VFAE
Sequences:
>Translated_324_residues MEQERDQTRLLAMYHTMVLARSLDERMWQLNRQGKAPFVISCQGHEAAQVGAAFAMRPKHDWIVPYYRDLAMMLAMGMTP REVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTGTQVPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAM NLAGVMKLPVIFFCENNGYAISVPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKC VRLTAHSSDDNDRTYRSPEDIKAMRTRDPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVNDATAYAEAAPLPDPSTVRKY VFAE >Mature_324_residues MEQERDQTRLLAMYHTMVLARSLDERMWQLNRQGKAPFVISCQGHEAAQVGAAFAMRPKHDWIVPYYRDLAMMLAMGMTP REVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTGTQVPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAM NLAGVMKLPVIFFCENNGYAISVPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKC VRLTAHSSDDNDRTYRSPEDIKAMRTRDPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVNDATAYAEAAPLPDPSTVRKY VFAE
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=319, Percent_Identity=35.1097178683386, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI258645172, Length=319, Percent_Identity=35.1097178683386, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI4885543, Length=315, Percent_Identity=28.2539682539683, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI291084742, Length=304, Percent_Identity=30.2631578947368, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI4505685, Length=304, Percent_Identity=30.2631578947368, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI291084744, Length=311, Percent_Identity=29.5819935691318, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI291084757, Length=304, Percent_Identity=26.6447368421053, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI86563355, Length=304, Percent_Identity=36.8421052631579, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI86563357, Length=304, Percent_Identity=36.8421052631579, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI32564172, Length=314, Percent_Identity=28.9808917197452, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17536047, Length=314, Percent_Identity=28.9808917197452, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6321026, Length=320, Percent_Identity=30.9375, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI21355903, Length=315, Percent_Identity=34.9206349206349, Blast_Score=194, Evalue=6e-50, Organism=Drosophila melanogaster, GI24639740, Length=266, Percent_Identity=33.4586466165414, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24639746, Length=266, Percent_Identity=33.4586466165414, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI24639744, Length=266, Percent_Identity=33.4586466165414, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI28571106, Length=266, Percent_Identity=33.4586466165414, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24639748, Length=309, Percent_Identity=29.126213592233, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 35654; Mature: 35654
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQERDQTRLLAMYHTMVLARSLDERMWQLNRQGKAPFVISCQGHEAAQVGAAFAMRPKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHEECCCC DWIVPYYRDLAMMLAMGMTPREVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEECCCCCC TQVPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAMNLAGVMKLPVIFFCENNGYA CCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEECCEEEEECCCCEE ISVPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKC EECCCHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VRLTAHSSDDNDRTYRSPEDIKAMRTRDPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVN EEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DATAYAEAAPLPDPSTVRKYVFAE HHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MEQERDQTRLLAMYHTMVLARSLDERMWQLNRQGKAPFVISCQGHEAAQVGAAFAMRPKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHEECCCC DWIVPYYRDLAMMLAMGMTPREVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEECCCCCC TQVPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAMNLAGVMKLPVIFFCENNGYA CCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEECCEEEEECCCCEE ISVPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKC EECCCHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VRLTAHSSDDNDRTYRSPEDIKAMRTRDPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVN EEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DATAYAEAAPLPDPSTVRKYVFAE HHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]