| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yceF [H]
Identifier: 159899091
GI number: 159899091
Start: 3296480
End: 3297367
Strand: Reverse
Name: yceF [H]
Synonym: Haur_2572
Alternate gene names: 159899091
Gene position: 3297367-3296480 (Counterclockwise)
Preceding gene: 159899092
Following gene: 159899090
Centisome position: 51.95
GC content: 46.06
Gene sequence:
>888_bases GTGTGGCAAGACATTTTTGATATTCTGCAAATTGTGTTTCTTTTAGTGTTTCTCGAAGGGATTCTTTCGATCGATAATGC CGCAGTTTTAGGCGCGATGGTGGCGCATTTGCCGCAAGATCAGCCGATTCCATGGCCCAAGTGGCTGCAATGGATGCAAG GCCATGGTGAGCGCTTTTTGGGTATGCAACAGGCAGCCGCATTAAAAGTTGGCTTGATTGGAGCCTATGTTGGACGTGGG TTAATGTTGGCGGTGGCCTTCATTATTACCGAAAATCCATGGGTTTTGGCGATTGGCTCAGGCTATTTGGTTTGGTTGAG TGTCAATCACTTTGCCCATATGCATCGCCGCGATCAAATTGATGAGCATAGTGAAGTCAAACAACGAACGACCGGTTTTT GGCAAACCGTCTTGATTATTGAAATGATCGATTTGGCGTTTAGCCTTGATAATGTGGTCGTAGCAGTCAATGCTGATCCA CAAAAGCGCTTTTGGGTGATTGGCTTAGGCGTAGCGATTGGAATTTTGGTGATGCGGTTCGCGGCCCAAATCTTCACTAG CTTGATTGAATGGGAACCAAACCTTGAACATGCCGCGTTTGCTTTGTTGCTAGCAATTGGCACCGAATCGGTGATCAAAA TTGTTTGGCATCTTGAAACACCGCATTGGCTGAAATTTGCAATTTCGATGACAATTTTGGCGTTAACTGTAGCACTTTCA CGTTTGCCATTCTTGAAGCCACTCAAAAAATTCTTACGTTTAGGTTTGCCGTTGGCTTCGATCGTTGATACGCTGGTTGG CTGGCTTTTATGGCCAATTCGTTGGTTGTTTGGCTTGTTGTTTGCGCCATTTCGCCAACGGGTTGCTGCTCGCATGCAAG GTGAATAG
Upstream 100 bases:
>100_bases GTTAATCAATAATCAACATTCTATTCATATCGAATTCGTGCAGGTGACGTATAATTAATGCTAGTGAATCAATCAGTTAT CATGAAAGGATACCGACGAC
Downstream 100 bases:
>100_bases GAGCAATCATGCAACTAACAGAGTTGGTGCGCTATTTGGATAGCTATTTGCAAACCGCCAAATTTCGCGATGCAAGCTTA AATGGCTTGCAAGTTGAAGG
Product: tellurium resistance protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MWQDIFDILQIVFLLVFLEGILSIDNAAVLGAMVAHLPQDQPIPWPKWLQWMQGHGERFLGMQQAAALKVGLIGAYVGRG LMLAVAFIITENPWVLAIGSGYLVWLSVNHFAHMHRRDQIDEHSEVKQRTTGFWQTVLIIEMIDLAFSLDNVVVAVNADP QKRFWVIGLGVAIGILVMRFAAQIFTSLIEWEPNLEHAAFALLLAIGTESVIKIVWHLETPHWLKFAISMTILALTVALS RLPFLKPLKKFLRLGLPLASIVDTLVGWLLWPIRWLFGLLFAPFRQRVAARMQGE
Sequences:
>Translated_295_residues MWQDIFDILQIVFLLVFLEGILSIDNAAVLGAMVAHLPQDQPIPWPKWLQWMQGHGERFLGMQQAAALKVGLIGAYVGRG LMLAVAFIITENPWVLAIGSGYLVWLSVNHFAHMHRRDQIDEHSEVKQRTTGFWQTVLIIEMIDLAFSLDNVVVAVNADP QKRFWVIGLGVAIGILVMRFAAQIFTSLIEWEPNLEHAAFALLLAIGTESVIKIVWHLETPHWLKFAISMTILALTVALS RLPFLKPLKKFLRLGLPLASIVDTLVGWLLWPIRWLFGLLFAPFRQRVAARMQGE >Mature_295_residues MWQDIFDILQIVFLLVFLEGILSIDNAAVLGAMVAHLPQDQPIPWPKWLQWMQGHGERFLGMQQAAALKVGLIGAYVGRG LMLAVAFIITENPWVLAIGSGYLVWLSVNHFAHMHRRDQIDEHSEVKQRTTGFWQTVLIIEMIDLAFSLDNVVVAVNADP QKRFWVIGLGVAIGILVMRFAAQIFTSLIEWEPNLEHAAFALLLAIGTESVIKIVWHLETPHWLKFAISMTILALTVALS RLPFLKPLKKFLRLGLPLASIVDTLVGWLLWPIRWLFGLLFAPFRQRVAARMQGE
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022493 - InterPro: IPR005496 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 33384; Mature: 33384
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQDIFDILQIVFLLVFLEGILSIDNAAVLGAMVAHLPQDQPIPWPKWLQWMQGHGERFL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH GMQQAAALKVGLIGAYVGRGLMLAVAFIITENPWVLAIGSGYLVWLSVNHFAHMHRRDQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHHHCC DEHSEVKQRTTGFWQTVLIIEMIDLAFSLDNVVVAVNADPQKRFWVIGLGVAIGILVMRF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHEEEEEHHHHHHHHHHHH AAQIFTSLIEWEPNLEHAAFALLLAIGTESVIKIVWHLETPHWLKFAISMTILALTVALS HHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLPFLKPLKKFLRLGLPLASIVDTLVGWLLWPIRWLFGLLFAPFRQRVAARMQGE HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWQDIFDILQIVFLLVFLEGILSIDNAAVLGAMVAHLPQDQPIPWPKWLQWMQGHGERFL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH GMQQAAALKVGLIGAYVGRGLMLAVAFIITENPWVLAIGSGYLVWLSVNHFAHMHRRDQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHHHCC DEHSEVKQRTTGFWQTVLIIEMIDLAFSLDNVVVAVNADPQKRFWVIGLGVAIGILVMRF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHEEEEEHHHHHHHHHHHH AAQIFTSLIEWEPNLEHAAFALLLAIGTESVIKIVWHLETPHWLKFAISMTILALTVALS HHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RLPFLKPLKKFLRLGLPLASIVDTLVGWLLWPIRWLFGLLFAPFRQRVAARMQGE HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]