| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899089
Identifier: 159899089
GI number: 159899089
Start: 3295029
End: 3295574
Strand: Reverse
Name: 159899089
Synonym: Haur_2570
Alternate gene names: NA
Gene position: 3295574-3295029 (Counterclockwise)
Preceding gene: 159899090
Following gene: 159899088
Centisome position: 51.93
GC content: 53.48
Gene sequence:
>546_bases ATGGGATTTCTCGACAATCTTAAAGGAACACTCTCGCAAGGTGTTGATCGCGCCAAGTTCGAGGCCGACAAATTACAACG TACCAGTCGCGTTCGCAGCGATATTGGCGATATGCAGCAGCAAATTGCCACGAATTATGGTTTGTTGGGCCAACGCGCTT ACGAACTGCACCAACAAGGTGTGCTAACTGCCCCCGAAGTTACGAGCTTGGTCAATTTGATCAACGATTTGCAAGCGCGT TTGACTTCAGCCCAAGCTGAATTAGAGCGTGCCCAAAACGAGCAATTTGTGGCAGTGCAAACCCCGCCACCACCAGCCTA TCCTCAGCCGTATGCGCCATCAGTCCCACCCCAACAAGCGCCGTATGCACCGCCAGTTGAGGCCCAAAATTATGTGCCAC CAACCAGCTATGCACCGCCAAGTGAAGCTCCTGCTGCACCACCAGTCGATAGCGGGGCGATTCCGATCGAGCGGTTGTGT CCAAGTTGTGGCTTTAAAGTGGCTGGTCAAGCGGTGTTCTGCCCTGAATGCGGCGCTCGTTTGTAA
Upstream 100 bases:
>100_bases CCAACCCATGGCCTAAGGCTTGCGGAAGGTAGCATTTGAGCTGTATTTCCGCTAGAATAGGCTTATAGCCATGGTTTCCA GGCTATTGTAGGAGGAATAT
Downstream 100 bases:
>100_bases AAACTTGAAGCTTGCTACAATACCCATGGTTGCTTTGGCAGCCATGGGTTTTTTGATCCTGAAAATAGTTAAGAATGGAA TAGAGCATGTTACCCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGFLDNLKGTLSQGVDRAKFEADKLQRTSRVRSDIGDMQQQIATNYGLLGQRAYELHQQGVLTAPEVTSLVNLINDLQAR LTSAQAELERAQNEQFVAVQTPPPPAYPQPYAPSVPPQQAPYAPPVEAQNYVPPTSYAPPSEAPAAPPVDSGAIPIERLC PSCGFKVAGQAVFCPECGARL
Sequences:
>Translated_181_residues MGFLDNLKGTLSQGVDRAKFEADKLQRTSRVRSDIGDMQQQIATNYGLLGQRAYELHQQGVLTAPEVTSLVNLINDLQAR LTSAQAELERAQNEQFVAVQTPPPPAYPQPYAPSVPPQQAPYAPPVEAQNYVPPTSYAPPSEAPAAPPVDSGAIPIERLC PSCGFKVAGQAVFCPECGARL >Mature_180_residues GFLDNLKGTLSQGVDRAKFEADKLQRTSRVRSDIGDMQQQIATNYGLLGQRAYELHQQGVLTAPEVTSLVNLINDLQARL TSAQAELERAQNEQFVAVQTPPPPAYPQPYAPSVPPQQAPYAPPVEAQNYVPPTSYAPPSEAPAAPPVDSGAIPIERLCP SCGFKVAGQAVFCPECGARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19442; Mature: 19311
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLDNLKGTLSQGVDRAKFEADKLQRTSRVRSDIGDMQQQIATNYGLLGQRAYELHQQG CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC VLTAPEVTSLVNLINDLQARLTSAQAELERAQNEQFVAVQTPPPPAYPQPYAPSVPPQQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC PYAPPVEAQNYVPPTSYAPPSEAPAAPPVDSGAIPIERLCPSCGFKVAGQAVFCPECGAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCC L C >Mature Secondary Structure GFLDNLKGTLSQGVDRAKFEADKLQRTSRVRSDIGDMQQQIATNYGLLGQRAYELHQQG CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC VLTAPEVTSLVNLINDLQARLTSAQAELERAQNEQFVAVQTPPPPAYPQPYAPSVPPQQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC PYAPPVEAQNYVPPTSYAPPSEAPAAPPVDSGAIPIERLCPSCGFKVAGQAVFCPECGAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA