Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899060

Identifier: 159899060

GI number: 159899060

Start: 3262797

End: 3263813

Strand: Reverse

Name: 159899060

Synonym: Haur_2541

Alternate gene names: NA

Gene position: 3263813-3262797 (Counterclockwise)

Preceding gene: 159899061

Following gene: 159899059

Centisome position: 51.43

GC content: 24.19

Gene sequence:

>1017_bases
ATGAATAGTATTAATATAATTTTCTCAGGATCTATTATTATAATGCTGGTAATATTGACATTTGAAATTAGAAAATATGG
AATTGTATACCTTAAAAATAAGGAAGTTAGAGAGGAAAATAAGAAAATTAGATTGGAATTGAATAGTTTAAATGAAAAAT
ATCATGAATTAATAATGATTAATAATGAATTAGTTTTAGATAATAATCAGCTAACATTGCATAAAAATGAAATAATTAAT
AGCAAAAAAGCTAATATATTAAGTGATAAGAAAATCAATAAATATGAATTAGAATATCAAATGCTGATTGAGTTGTATAA
TCAAATGAACATAGAATTTAATAAAAAGAATGTATTGATCGAGAAATTAAGGGCAAAAATGATTTTATTTGATTTATTTA
TTGAAATAAATAATAAATATAGAAAATATCACGGTAATGAAAGTGATAATAGAAAGATGATTAGTAATTACATTTATAAG
CTATTTTTTGATATTGAACAAGGGTTGAGTAAATATTATAATGAAAAAATCAAACTTAGAACAACAATTTTATTTCCTAA
AATTGAAAATTTAGATTTATTGAAAGAGTATTTACGTGTGTATGCTTATTTTGAAATAGGAAATGTTAGTATTTATGATG
TTGAATTTTATATAGGCGAAGATCTTGAGAAACGTAAAGAGAAATCAGGGGTAGCAGGGATTGCTTATATTGAAAAAAGA
GTAGTTTATGCTCAGTTTAGTATGTCTAATGATAAACCTATAAAGAAGAATCCTGATGCTCAACATCATATTTTCTTGCC
AATCGAGCAAGAAGAGAAAGGTATATTAGAATACTTAATGATCTATGCCCAATATATTAATGTTAGTGATAAATTGAATG
GGGTTATTTGTATTGATAGTATGAAAAATGATTTATTTGATGATAAGAATCTTGTTCGTTACTTCAATGAGTTTGTGTTT
TATAATATTGAGCAATTTTTGGGGCGCTATGCCGATGATATTATGAATGGTTGGTAA

Upstream 100 bases:

>100_bases
AAGCGCAACCAGAGCATTACGCAATATTGGCTTTGAAAAAGCTTGTGAGGCTGAGATTCGGAATAAGTTATCGGGGTTTT
TTAACGAATAAGGATATATT

Downstream 100 bases:

>100_bases
CAATAACTAAACGCAAATCGAAGGACATAGCCTAAAACAGAATATTCAGGGAGGCGGAAGGTTCACTGAATTTGATCCAC
GAAGGGCAACTGAAAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNSINIIFSGSIIIMLVILTFEIRKYGIVYLKNKEVREENKKIRLELNSLNEKYHELIMINNELVLDNNQLTLHKNEIIN
SKKANILSDKKINKYELEYQMLIELYNQMNIEFNKKNVLIEKLRAKMILFDLFIEINNKYRKYHGNESDNRKMISNYIYK
LFFDIEQGLSKYYNEKIKLRTTILFPKIENLDLLKEYLRVYAYFEIGNVSIYDVEFYIGEDLEKRKEKSGVAGIAYIEKR
VVYAQFSMSNDKPIKKNPDAQHHIFLPIEQEEKGILEYLMIYAQYINVSDKLNGVICIDSMKNDLFDDKNLVRYFNEFVF
YNIEQFLGRYADDIMNGW

Sequences:

>Translated_338_residues
MNSINIIFSGSIIIMLVILTFEIRKYGIVYLKNKEVREENKKIRLELNSLNEKYHELIMINNELVLDNNQLTLHKNEIIN
SKKANILSDKKINKYELEYQMLIELYNQMNIEFNKKNVLIEKLRAKMILFDLFIEINNKYRKYHGNESDNRKMISNYIYK
LFFDIEQGLSKYYNEKIKLRTTILFPKIENLDLLKEYLRVYAYFEIGNVSIYDVEFYIGEDLEKRKEKSGVAGIAYIEKR
VVYAQFSMSNDKPIKKNPDAQHHIFLPIEQEEKGILEYLMIYAQYINVSDKLNGVICIDSMKNDLFDDKNLVRYFNEFVF
YNIEQFLGRYADDIMNGW
>Mature_338_residues
MNSINIIFSGSIIIMLVILTFEIRKYGIVYLKNKEVREENKKIRLELNSLNEKYHELIMINNELVLDNNQLTLHKNEIIN
SKKANILSDKKINKYELEYQMLIELYNQMNIEFNKKNVLIEKLRAKMILFDLFIEINNKYRKYHGNESDNRKMISNYIYK
LFFDIEQGLSKYYNEKIKLRTTILFPKIENLDLLKEYLRVYAYFEIGNVSIYDVEFYIGEDLEKRKEKSGVAGIAYIEKR
VVYAQFSMSNDKPIKKNPDAQHHIFLPIEQEEKGILEYLMIYAQYINVSDKLNGVICIDSMKNDLFDDKNLVRYFNEFVF
YNIEQFLGRYADDIMNGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40479; Mature: 40479

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSINIIFSGSIIIMLVILTFEIRKYGIVYLKNKEVREENKKIRLELNSLNEKYHELIMI
CCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEEEEHHHCHHHEEEEEE
NNELVLDNNQLTLHKNEIINSKKANILSDKKINKYELEYQMLIELYNQMNIEFNKKNVLI
CCEEEEECCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCHHHHH
EKLRAKMILFDLFIEINNKYRKYHGNESDNRKMISNYIYKLFFDIEQGLSKYYNEKIKLR
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TTILFPKIENLDLLKEYLRVYAYFEIGNVSIYDVEFYIGEDLEKRKEKSGVAGIAYIEKR
EEEECCCCCCHHHHHHHHHHEEEEEECCEEEEEEEEEECCCHHHHHHHCCCEEHHHHHHE
VVYAQFSMSNDKPIKKNPDAQHHIFLPIEQEEKGILEYLMIYAQYINVSDKLNGVICIDS
EEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
MKNDLFDDKNLVRYFNEFVFYNIEQFLGRYADDIMNGW
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSINIIFSGSIIIMLVILTFEIRKYGIVYLKNKEVREENKKIRLELNSLNEKYHELIMI
CCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEEEEHHHCHHHEEEEEE
NNELVLDNNQLTLHKNEIINSKKANILSDKKINKYELEYQMLIELYNQMNIEFNKKNVLI
CCEEEEECCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCHHHHH
EKLRAKMILFDLFIEINNKYRKYHGNESDNRKMISNYIYKLFFDIEQGLSKYYNEKIKLR
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TTILFPKIENLDLLKEYLRVYAYFEIGNVSIYDVEFYIGEDLEKRKEKSGVAGIAYIEKR
EEEECCCCCCHHHHHHHHHHEEEEEECCEEEEEEEEEECCCHHHHHHHCCCEEHHHHHHE
VVYAQFSMSNDKPIKKNPDAQHHIFLPIEQEEKGILEYLMIYAQYINVSDKLNGVICIDS
EEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
MKNDLFDDKNLVRYFNEFVFYNIEQFLGRYADDIMNGW
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA