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The map label for this gene is 159899061

Identifier: 159899061

GI number: 159899061

Start: 3263823

End: 3264803

Strand: Reverse

Name: 159899061

Synonym: Haur_2542

Alternate gene names: NA

Gene position: 3264803-3263823 (Counterclockwise)

Preceding gene: 159899062

Following gene: 159899060

Centisome position: 51.44

GC content: 42.41

Gene sequence:

>981_bases
ATGAATATTGTAAGCATTGATGGTGGGGGCTATTTGGGTGTTGCTTCATTGGCATTTATCGAAGAAATCGAACGTTTTTA
TCATACAAGTTTCCATCAAACATTTACGCTGTTTTGCGGAACAAGCACTGGGGCAATTATTGCGCTTGGTTTGGCTTCTG
GTAAAACTGGCAAAGAATTAATGCAGATCTATACGAAATTTGGTTCTTTGGTATTTAATAATCGATTATTTTGGATGCGC
AAATTTCGTTTGATCCGTGGCTTTTTCTTAGCGCAATATTCGAATACTGCCTTACGGAAATTGCTCAAAGATTTTTTTGG
CGATATTACTTTGGGTGATATTAAAGCTCAAGGCAAACGGGTTATTATTACGGCTTTTAATTTGAGCAATGGCAAGCCAA
GAGTTTTTAAAACTGATCATTCAGCCGATTTAAATCGTGATGATCGTTATTATCTTCGCGATATTGCCTTAGCGAGTTCG
GCGGCCCCAATTTACTTACCAATTGTGACTCTGCAAAACCCGCACACAGGAGTTGAAGAACGATTCTGTGATGGTGGGGT
TTTTGCCAATCATCCAGCCTTGTTGGGCTATGCTGAAGCAGTATCACACTTAGCCCAAGATCCGCAATCCCTAAAGATTT
TGTCGATCGCTACTCCGCGGGCTGAGTTGGGACAAAATTTTGTGAAATTGAGCCGCTGGCAACAGACCGTCTTGAGTCGA
GGGGTTATTTCTTGGAGTGATTCGATCGCTAGTATTGCAATTGATGCGACCTCGATGATTGCCCATGAAACACTCAGGCG
TGTGTTTGCTTGGCAACCTGCAATGCAATCGCGCTATGTACGGATTACCCTACCTCAGCCTCAGACGGTTGCTCTCGATA
TTGCTAACGAAAGCGCAACCAGAGCATTACGCAATATTGGCTTTGAAAAAGCTTGTGAGGCTGAGATTCGGAATAAGTTA
TCGGGGTTTTTTAACGAATAA

Upstream 100 bases:

>100_bases
TCTGAGAAGGCGAAAGAGAAAAATTCGCGCTTTGTAGTTGTTATCTCAGAGGATGGATATATTGACTTTTTTCCTGAACC
TGAAAAATAGGAGAATAAGT

Downstream 100 bases:

>100_bases
GGATATATTATGAATAGTATTAATATAATTTTCTCAGGATCTATTATTATAATGCTGGTAATATTGACATTTGAAATTAG
AAAATATGGAATTGTATACC

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Related Protein; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin-Like Protein; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNIVSIDGGGYLGVASLAFIEEIERFYHTSFHQTFTLFCGTSTGAIIALGLASGKTGKELMQIYTKFGSLVFNNRLFWMR
KFRLIRGFFLAQYSNTALRKLLKDFFGDITLGDIKAQGKRVIITAFNLSNGKPRVFKTDHSADLNRDDRYYLRDIALASS
AAPIYLPIVTLQNPHTGVEERFCDGGVFANHPALLGYAEAVSHLAQDPQSLKILSIATPRAELGQNFVKLSRWQQTVLSR
GVISWSDSIASIAIDATSMIAHETLRRVFAWQPAMQSRYVRITLPQPQTVALDIANESATRALRNIGFEKACEAEIRNKL
SGFFNE

Sequences:

>Translated_326_residues
MNIVSIDGGGYLGVASLAFIEEIERFYHTSFHQTFTLFCGTSTGAIIALGLASGKTGKELMQIYTKFGSLVFNNRLFWMR
KFRLIRGFFLAQYSNTALRKLLKDFFGDITLGDIKAQGKRVIITAFNLSNGKPRVFKTDHSADLNRDDRYYLRDIALASS
AAPIYLPIVTLQNPHTGVEERFCDGGVFANHPALLGYAEAVSHLAQDPQSLKILSIATPRAELGQNFVKLSRWQQTVLSR
GVISWSDSIASIAIDATSMIAHETLRRVFAWQPAMQSRYVRITLPQPQTVALDIANESATRALRNIGFEKACEAEIRNKL
SGFFNE
>Mature_326_residues
MNIVSIDGGGYLGVASLAFIEEIERFYHTSFHQTFTLFCGTSTGAIIALGLASGKTGKELMQIYTKFGSLVFNNRLFWMR
KFRLIRGFFLAQYSNTALRKLLKDFFGDITLGDIKAQGKRVIITAFNLSNGKPRVFKTDHSADLNRDDRYYLRDIALASS
AAPIYLPIVTLQNPHTGVEERFCDGGVFANHPALLGYAEAVSHLAQDPQSLKILSIATPRAELGQNFVKLSRWQQTVLSR
GVISWSDSIASIAIDATSMIAHETLRRVFAWQPAMQSRYVRITLPQPQTVALDIANESATRALRNIGFEKACEAEIRNKL
SGFFNE

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=215, Percent_Identity=35.3488372093023, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17567809, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17551040, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45551543, Length=359, Percent_Identity=22.8412256267409, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45551542, Length=359, Percent_Identity=22.8412256267409, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45551541, Length=359, Percent_Identity=22.8412256267409, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45550585, Length=360, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36340; Mature: 36340

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVSIDGGGYLGVASLAFIEEIERFYHTSFHQTFTLFCGTSTGAIIALGLASGKTGKEL
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHH
MQIYTKFGSLVFNNRLFWMRKFRLIRGFFLAQYSNTALRKLLKDFFGDITLGDIKAQGKR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCE
VIITAFNLSNGKPRVFKTDHSADLNRDDRYYLRDIALASSAAPIYLPIVTLQNPHTGVEE
EEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHH
RFCDGGVFANHPALLGYAEAVSHLAQDPQSLKILSIATPRAELGQNFVKLSRWQQTVLSR
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
GVISWSDSIASIAIDATSMIAHETLRRVFAWQPAMQSRYVRITLPQPQTVALDIANESAT
CCCCCCCCHHHEEEHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEEEEECCHHHH
RALRNIGFEKACEAEIRNKLSGFFNE
HHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIVSIDGGGYLGVASLAFIEEIERFYHTSFHQTFTLFCGTSTGAIIALGLASGKTGKEL
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHH
MQIYTKFGSLVFNNRLFWMRKFRLIRGFFLAQYSNTALRKLLKDFFGDITLGDIKAQGKR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCE
VIITAFNLSNGKPRVFKTDHSADLNRDDRYYLRDIALASSAAPIYLPIVTLQNPHTGVEE
EEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHH
RFCDGGVFANHPALLGYAEAVSHLAQDPQSLKILSIATPRAELGQNFVKLSRWQQTVLSR
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHC
GVISWSDSIASIAIDATSMIAHETLRRVFAWQPAMQSRYVRITLPQPQTVALDIANESAT
CCCCCCCCHHHEEEHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEEEEECCHHHH
RALRNIGFEKACEAEIRNKLSGFFNE
HHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA